Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RTP4Q96DX8 AL133373.2-201ENST00000623187 2828 ntBASIC18.92■□□□□ 0.62
RTP4Q96DX8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 SLC25A1P2-201ENST00000430693 912 ntBASIC18.92■□□□□ 0.62
RTP4Q96DX8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.92■□□□□ 0.62
RTP4Q96DX8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.92■□□□□ 0.62
RTP4Q96DX8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.92■□□□□ 0.62
RTP4Q96DX8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RTP4Q96DX8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.92■□□□□ 0.62
RTP4Q96DX8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTP4Q96DX8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 HOXB1-202ENST00000577092 1414 ntBASIC18.91■□□□□ 0.62
RTP4Q96DX8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 RBM17P1-201ENST00000453646 1190 ntBASIC18.91■□□□□ 0.62
RTP4Q96DX8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
RTP4Q96DX8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTP4Q96DX8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTP4Q96DX8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTP4Q96DX8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 MMP23A-201ENST00000234610 1017 ntBASIC18.9■□□□□ 0.62
RTP4Q96DX8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTP4Q96DX8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTP4Q96DX8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTP4Q96DX8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 SLC25A6P5-201ENST00000435663 894 ntBASIC18.9■□□□□ 0.62
RTP4Q96DX8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 AL353719.1-201ENST00000566847 864 ntBASIC18.9■□□□□ 0.62
RTP4Q96DX8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTP4Q96DX8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.9■□□□□ 0.62
RTP4Q96DX8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTP4Q96DX8 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.9■□□□□ 0.62
RTP4Q96DX8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RTP4Q96DX8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.89■□□□□ 0.62
RTP4Q96DX8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTP4Q96DX8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RTP4Q96DX8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
RTP4Q96DX8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.89■□□□□ 0.61
RTP4Q96DX8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 AC018470.1-201ENST00000624790 3129 ntBASIC18.89■□□□□ 0.61
RTP4Q96DX8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.89■□□□□ 0.61
RTP4Q96DX8 WWOX-216ENST00000569818 525 ntBASIC18.89■□□□□ 0.61
RTP4Q96DX8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.89■□□□□ 0.61
RTP4Q96DX8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.89■□□□□ 0.61
RTP4Q96DX8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.89■□□□□ 0.61
RTP4Q96DX8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RTP4Q96DX8 KRT8P7-201ENST00000533003 1432 ntBASIC18.89■□□□□ 0.61
RTP4Q96DX8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.89■□□□□ 0.61
RTP4Q96DX8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTP4Q96DX8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.89■□□□□ 0.61
RTP4Q96DX8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.88■□□□□ 0.61
RTP4Q96DX8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTP4Q96DX8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.88■□□□□ 0.61
RTP4Q96DX8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RTP4Q96DX8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTP4Q96DX8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms