Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S1Q92572 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
AP3S1Q92572 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
AP3S1Q92572 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 KRT18P14-201ENST00000534205 1250 ntBASIC16.35■□□□□ 0.21
AP3S1Q92572 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.35■□□□□ 0.21
AP3S1Q92572 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S1Q92572 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S1Q92572 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S1Q92572 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S1Q92572 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
AP3S1Q92572 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S1Q92572 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AP3S1Q92572 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S1Q92572 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
AP3S1Q92572 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S1Q92572 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP3S1Q92572 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S1Q92572 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 AL390719.1-204ENST00000412397 1219 ntBASIC16.34■□□□□ 0.21
AP3S1Q92572 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
AP3S1Q92572 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S1Q92572 SUDS3P1-201ENST00000505831 966 ntBASIC16.34■□□□□ 0.21
AP3S1Q92572 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.34■□□□□ 0.21
AP3S1Q92572 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S1Q92572 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.34■□□□□ 0.21
AP3S1Q92572 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
AP3S1Q92572 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP3S1Q92572 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.34■□□□□ 0.21
AP3S1Q92572 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S1Q92572 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
AP3S1Q92572 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.33■□□□□ 0.21
AP3S1Q92572 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.33■□□□□ 0.21
AP3S1Q92572 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
AP3S1Q92572 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.33■□□□□ 0.21
AP3S1Q92572 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
AP3S1Q92572 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.33■□□□□ 0.21
AP3S1Q92572 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
AP3S1Q92572 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
AP3S1Q92572 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S1Q92572 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S1Q92572 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3S1Q92572 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3S1Q92572 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
AP3S1Q92572 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
AP3S1Q92572 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S1Q92572 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3S1Q92572 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
AP3S1Q92572 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S1Q92572 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S1Q92572 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.33■□□□□ 0.2
AP3S1Q92572 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.33■□□□□ 0.2
AP3S1Q92572 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S1Q92572 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3S1Q92572 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3S1Q92572 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
AP3S1Q92572 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP3S1Q92572 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 AL355472.2-201ENST00000422958 438 ntBASIC16.32■□□□□ 0.2
AP3S1Q92572 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3S1Q92572 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3S1Q92572 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.32■□□□□ 0.2
AP3S1Q92572 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms