Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF138Q8WVD3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AC024563.2-201ENST00000603282 481 ntBASIC16.72■□□□□ 0.27
RNF138Q8WVD3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AL162741.1-201ENST00000565563 1558 ntBASIC16.72■□□□□ 0.27
RNF138Q8WVD3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 AC090164.3-201ENST00000610780 2143 ntBASIC16.72■□□□□ 0.27
RNF138Q8WVD3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF138Q8WVD3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 AC008687.5-201ENST00000593746 558 ntBASIC16.71■□□□□ 0.27
RNF138Q8WVD3 AC116407.4-201ENST00000623319 1061 ntBASIC16.71■□□□□ 0.27
RNF138Q8WVD3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
RNF138Q8WVD3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.71■□□□□ 0.26
RNF138Q8WVD3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.71■□□□□ 0.26
RNF138Q8WVD3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 AC005332.1-201ENST00000577698 1310 ntBASIC16.7■□□□□ 0.26
RNF138Q8WVD3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 GMCL1P1-201ENST00000463439 1581 ntBASIC16.7■□□□□ 0.26
RNF138Q8WVD3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
RNF138Q8WVD3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms