Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RNF139Q8WU17 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF139Q8WU17 Z98044.1-201ENST00000632503 1764 ntBASIC19.47■□□□□ 0.71
RNF139Q8WU17 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.46■□□□□ 0.71
RNF139Q8WU17 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF139Q8WU17 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF139Q8WU17 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF139Q8WU17 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF139Q8WU17 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF139Q8WU17 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF139Q8WU17 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF139Q8WU17 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RNF139Q8WU17 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF139Q8WU17 MTMR9LP-203ENST00000426597 1545 ntBASIC19.46■□□□□ 0.71
RNF139Q8WU17 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNF139Q8WU17 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF139Q8WU17 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 AL138781.2-201ENST00000617896 1843 ntBASIC19.44■□□□□ 0.7
RNF139Q8WU17 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.44■□□□□ 0.7
RNF139Q8WU17 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 AC034232.1-201ENST00000506026 1064 ntBASIC19.44■□□□□ 0.7
RNF139Q8WU17 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 NTF6B-201ENST00000591913 560 ntBASIC19.44■□□□□ 0.7
RNF139Q8WU17 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF139Q8WU17 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF139Q8WU17 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF139Q8WU17 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms