Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LSMEM1Q8N8F7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 MYLKP1-201ENST00000509077 1580 ntBASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 CRYGFP-201ENST00000418459 633 ntBASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 TMEM191A-211ENST00000637163 1067 ntBASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSMEM1Q8N8F7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 AP000593.1-201ENST00000393668 712 ntBASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
LSMEM1Q8N8F7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 AC034236.2-201ENST00000606662 1610 ntBASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 UNC93B2-201ENST00000285383 730 ntBASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 SLC25A1P2-201ENST00000430693 912 ntBASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 MIR4785-201ENST00000585005 73 ntBASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.97■□□□□ 0.31
LSMEM1Q8N8F7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.96■□□□□ 0.31
LSMEM1Q8N8F7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.96■□□□□ 0.31
LSMEM1Q8N8F7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSMEM1Q8N8F7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.96■□□□□ 0.31
LSMEM1Q8N8F7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LSMEM1Q8N8F7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms