Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCML4Q8N228 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.25■□□□□ 0.67
SCML4Q8N228 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SCML4Q8N228 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SCML4Q8N228 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.25■□□□□ 0.67
SCML4Q8N228 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCML4Q8N228 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.24■□□□□ 0.67
SCML4Q8N228 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCML4Q8N228 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.24■□□□□ 0.67
SCML4Q8N228 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SCML4Q8N228 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.24■□□□□ 0.67
SCML4Q8N228 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.24■□□□□ 0.67
SCML4Q8N228 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.24■□□□□ 0.67
SCML4Q8N228 AC008687.5-201ENST00000593746 558 ntBASIC19.24■□□□□ 0.67
SCML4Q8N228 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.24■□□□□ 0.67
SCML4Q8N228 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCML4Q8N228 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
SCML4Q8N228 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SCML4Q8N228 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCML4Q8N228 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCML4Q8N228 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.23■□□□□ 0.67
SCML4Q8N228 ARMC10P1-201ENST00000313754 855 ntBASIC19.23■□□□□ 0.67
SCML4Q8N228 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.23■□□□□ 0.67
SCML4Q8N228 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.23■□□□□ 0.67
SCML4Q8N228 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.23■□□□□ 0.67
SCML4Q8N228 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
SCML4Q8N228 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.23■□□□□ 0.67
SCML4Q8N228 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCML4Q8N228 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SCML4Q8N228 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCML4Q8N228 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SCML4Q8N228 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCML4Q8N228 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SCML4Q8N228 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.22■□□□□ 0.67
SCML4Q8N228 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.22■□□□□ 0.67
SCML4Q8N228 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SCML4Q8N228 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SCML4Q8N228 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.22■□□□□ 0.67
SCML4Q8N228 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.22■□□□□ 0.67
SCML4Q8N228 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SCML4Q8N228 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.22■□□□□ 0.67
SCML4Q8N228 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.22■□□□□ 0.67
SCML4Q8N228 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SCML4Q8N228 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.22■□□□□ 0.67
SCML4Q8N228 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.22■□□□□ 0.67
SCML4Q8N228 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SCML4Q8N228 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.22■□□□□ 0.67
SCML4Q8N228 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.22■□□□□ 0.67
SCML4Q8N228 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SCML4Q8N228 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.22■□□□□ 0.67
SCML4Q8N228 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCML4Q8N228 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.22■□□□□ 0.67
SCML4Q8N228 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SCML4Q8N228 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.22■□□□□ 0.67
SCML4Q8N228 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.21■□□□□ 0.67
SCML4Q8N228 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 AC126763.1-201ENST00000552015 2118 ntBASIC19.21■□□□□ 0.67
SCML4Q8N228 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCML4Q8N228 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms