Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 HBZP1-201ENST00000354915 429 ntBASIC17.21■□□□□ 0.35
BEST3Q8N1M1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST3Q8N1M1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
BEST3Q8N1M1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BEST3Q8N1M1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
BEST3Q8N1M1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 KRT8P32-201ENST00000512863 1461 ntBASIC17.2■□□□□ 0.34
BEST3Q8N1M1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 SPDYE13P-201ENST00000445314 798 ntBASIC17.2■□□□□ 0.34
BEST3Q8N1M1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 AC120498.9-201ENST00000339021 3867 ntBASIC17.2■□□□□ 0.34
BEST3Q8N1M1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BEST3Q8N1M1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 KRT18P23-201ENST00000435622 1283 ntBASIC17.19■□□□□ 0.34
BEST3Q8N1M1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 AL157888.1-201ENST00000631930 593 ntBASIC17.19■□□□□ 0.34
BEST3Q8N1M1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST3Q8N1M1 AC026471.1-201ENST00000564629 3026 ntBASIC17.18■□□□□ 0.34
BEST3Q8N1M1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST3Q8N1M1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
BEST3Q8N1M1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST3Q8N1M1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms