Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.41■□□□□ 0.54
TMEFF1Q8IYR6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 SAPCD2P3-201ENST00000455031 850 ntBASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 RN7SL606P-201ENST00000472779 293 ntBASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 VENTXP7-201ENST00000475503 772 ntBASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TMEFF1Q8IYR6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMEFF1Q8IYR6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.39■□□□□ 0.54
TMEFF1Q8IYR6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.39■□□□□ 0.54
TMEFF1Q8IYR6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 AP000593.1-201ENST00000393668 712 ntBASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 MINOS1P3-201ENST00000457048 203 ntBASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 AC091607.1-201ENST00000490318 1060 ntBASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 AF238378.1-201ENST00000526806 358 ntBASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 AP005901.3-202ENST00000581653 237 ntBASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 MIR3180-4-201ENST00000582223 153 ntBASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 BX640515.1-201ENST00000617215 977 ntBASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEFF1Q8IYR6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 AL671883.3-201ENST00000603274 991 ntBASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 REXO1L6P-202ENST00000619970 1078 ntBASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 AL353692.3-201ENST00000407031 1396 ntBASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEFF1Q8IYR6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEFF1Q8IYR6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms