Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 HMGA1P5-201ENST00000412453 271 ntBASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 KRT18P23-201ENST00000435622 1283 ntBASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 AL512604.3-201ENST00000569583 964 ntBASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 FAM87A-204ENST00000613235 858 ntBASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC65Q8IXS2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 KRT18P22-201ENST00000402024 1347 ntBASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CCDC65Q8IXS2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 NEFHP1-201ENST00000412845 2629 ntBASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC65Q8IXS2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC65Q8IXS2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms