Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 AC104390.1-201ENST00000555663 520 ntBASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 AL031432.5-201ENST00000641059 760 ntBASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCUBE3Q8IX30 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 AP000523.1-201ENST00000398242 1049 ntBASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 SEC1P-202ENST00000473944 940 ntBASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 AL441883.1-201ENST00000566170 1045 ntBASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 MYC-208ENST00000641036 567 ntBASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCUBE3Q8IX30 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 AC020763.4-201ENST00000623414 4170 ntBASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 AP000593.1-201ENST00000393668 712 ntBASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
SCUBE3Q8IX30 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 AK4P3-201ENST00000418260 669 ntBASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.46■□□□□ 0.71
SCUBE3Q8IX30 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms