Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDKL3Q8IVW4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 AC034236.2-201ENST00000606662 1610 ntBASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 MIR3180-5-201ENST00000583743 153 ntBASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 MIR4785-201ENST00000585005 73 ntBASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.07■□□□□ 0.64
CDKL3Q8IVW4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDKL3Q8IVW4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 UNC93B2-201ENST00000285383 730 ntBASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 RBM17P1-201ENST00000453646 1190 ntBASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 MIR4674-201ENST00000582457 87 ntBASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 TMEM191A-211ENST00000637163 1067 ntBASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDKL3Q8IVW4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL3Q8IVW4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms