Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 MCCD1P1-208ENST00000445732 328 ntBASIC17.17■□□□□ 0.34
VRK2Q86Y07 MYLKP1-201ENST00000509077 1580 ntBASIC17.17■□□□□ 0.34
VRK2Q86Y07 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.17■□□□□ 0.34
VRK2Q86Y07 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VRK2Q86Y07 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VRK2Q86Y07 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.16■□□□□ 0.34
VRK2Q86Y07 AC135776.1-201ENST00000319817 2481 ntBASIC17.15■□□□□ 0.34
VRK2Q86Y07 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 AL162741.1-201ENST00000565563 1558 ntBASIC17.15■□□□□ 0.34
VRK2Q86Y07 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.15■□□□□ 0.34
VRK2Q86Y07 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VRK2Q86Y07 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 MIR564-202ENST00000385049 94 ntBASIC17.15■□□□□ 0.34
VRK2Q86Y07 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VRK2Q86Y07 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 AP003071.4-201ENST00000562276 1284 ntBASIC17.15■□□□□ 0.34
VRK2Q86Y07 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.15■□□□□ 0.34
VRK2Q86Y07 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.15■□□□□ 0.34
VRK2Q86Y07 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VRK2Q86Y07 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VRK2Q86Y07 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.15■□□□□ 0.34
VRK2Q86Y07 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 AC008550.1-201ENST00000511500 884 ntBASIC17.14■□□□□ 0.33
VRK2Q86Y07 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms