Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRTM1Q86UE6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM1Q86UE6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 MYLKP1-201ENST00000509077 1580 ntBASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 PRSS44-201ENST00000515154 1146 ntBASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 AL138781.1-201ENST00000566567 1274 ntBASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM1Q86UE6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 FLJ13224-201ENST00000313737 1514 ntBASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms