Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF550Q7Z398 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.1■□□□□ 0.33
ZNF550Q7Z398 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 AL023284.2-201ENST00000405850 579 ntBASIC17.09■□□□□ 0.33
ZNF550Q7Z398 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 AC008622.2-201ENST00000617006 1229 ntBASIC17.09■□□□□ 0.33
ZNF550Q7Z398 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.09■□□□□ 0.33
ZNF550Q7Z398 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF550Q7Z398 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 NEFHP1-201ENST00000412845 2629 ntBASIC17.08■□□□□ 0.33
ZNF550Q7Z398 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 AC008556.1-201ENST00000610908 2040 ntBASIC17.08■□□□□ 0.33
ZNF550Q7Z398 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ZNF550Q7Z398 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 CYP2D8P-201ENST00000433633 1490 ntBASIC17.08■□□□□ 0.32
ZNF550Q7Z398 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 KRT18P41-201ENST00000518924 1277 ntBASIC17.08■□□□□ 0.32
ZNF550Q7Z398 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 RN7SL850P-201ENST00000579959 291 ntBASIC17.08■□□□□ 0.32
ZNF550Q7Z398 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF550Q7Z398 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 LINC01568-207ENST00000641790 1380 ntBASIC17.07■□□□□ 0.32
ZNF550Q7Z398 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 MIR564-202ENST00000385049 94 ntBASIC17.07■□□□□ 0.32
ZNF550Q7Z398 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 FITM1-202ENST00000559294 800 ntBASIC17.07■□□□□ 0.32
ZNF550Q7Z398 NAPSB-206ENST00000562112 1266 ntBASIC17.07■□□□□ 0.32
ZNF550Q7Z398 AC145285.6-201ENST00000604632 637 ntBASIC17.07■□□□□ 0.32
ZNF550Q7Z398 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms