Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHFQ7M4L6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.79■□□□□ 0.28
SHFQ7M4L6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SHFQ7M4L6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHFQ7M4L6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHFQ7M4L6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHFQ7M4L6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHFQ7M4L6 AC134043.2-201ENST00000624206 2238 ntBASIC16.77■□□□□ 0.28
SHFQ7M4L6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHFQ7M4L6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHFQ7M4L6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SHFQ7M4L6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHFQ7M4L6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 AC026366.1-201ENST00000488803 879 ntBASIC16.77■□□□□ 0.28
SHFQ7M4L6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 AC069544.1-201ENST00000609399 999 ntBASIC16.77■□□□□ 0.28
SHFQ7M4L6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.77■□□□□ 0.28
SHFQ7M4L6 AC139713.2-201ENST00000641328 2723 ntBASIC16.77■□□□□ 0.28
SHFQ7M4L6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.77■□□□□ 0.28
SHFQ7M4L6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHFQ7M4L6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.77■□□□□ 0.27
SHFQ7M4L6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.77■□□□□ 0.27
SHFQ7M4L6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHFQ7M4L6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SHFQ7M4L6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SHFQ7M4L6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHFQ7M4L6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHFQ7M4L6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.77■□□□□ 0.27
SHFQ7M4L6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHFQ7M4L6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHFQ7M4L6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SHFQ7M4L6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.77■□□□□ 0.27
SHFQ7M4L6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 RNA5SP413-201ENST00000516373 109 ntBASIC16.76■□□□□ 0.27
SHFQ7M4L6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SHFQ7M4L6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHFQ7M4L6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 KRT8P41-201ENST00000533985 1514 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms