Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 IGHGP-201ENST00000390555 1178 ntBASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC149Q6ZUS6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 LINC00167-201ENST00000530583 1419 ntBASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 GUSBP12-201ENST00000513727 720 ntBASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 AC099336.1-202ENST00000602961 463 ntBASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 AL353801.3-201ENST00000609898 542 ntBASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 AL158211.5-201ENST00000623583 2518 ntBASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC149Q6ZUS6 AC233702.3-201ENST00000578656 1387 ntBASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 KRT89P-201ENST00000620027 1478 ntBASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 HEIH-201ENST00000623091 1652 ntBASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC149Q6ZUS6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 AP000593.1-201ENST00000393668 712 ntBASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
CCDC149Q6ZUS6 KRT16P4-201ENST00000453883 522 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms