Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 NFYC-AS1-201ENST00000606277 1687 ntBASIC11.76□□□□□ -0.53
LINC00575Q6W349 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 PEMT-206ENST00000435340 960 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 AC068338.2-201ENST00000563278 1430 ntBASIC11.76□□□□□ -0.53
LINC00575Q6W349 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC00575Q6W349 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC00575Q6W349 MTMR9LP-203ENST00000426597 1545 ntBASIC11.76□□□□□ -0.53
LINC00575Q6W349 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 HYI-206ENST00000372434 1025 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 RAB43-208ENST00000615093 783 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 AC008694.1-202ENST00000636953 945 ntBASIC11.75□□□□□ -0.53
LINC00575Q6W349 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LINC00575Q6W349 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LINC00575Q6W349 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LINC00575Q6W349 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC00575Q6W349 GPX1P1-201ENST00000388829 606 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms