Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RNF43Q68DV7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF43Q68DV7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 AL450487.1-201ENST00000426799 995 ntBASIC19.44■□□□□ 0.7
RNF43Q68DV7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
RNF43Q68DV7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF43Q68DV7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 AC093458.2-201ENST00000623150 629 ntBASIC19.43■□□□□ 0.7
RNF43Q68DV7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF43Q68DV7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF43Q68DV7 AC018470.1-201ENST00000624790 3129 ntBASIC19.42■□□□□ 0.7
RNF43Q68DV7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 AC090164.3-201ENST00000610780 2143 ntBASIC19.42■□□□□ 0.7
RNF43Q68DV7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 AL133373.2-201ENST00000623187 2828 ntBASIC19.42■□□□□ 0.7
RNF43Q68DV7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 TSPY5P-201ENST00000426936 936 ntBASIC19.42■□□□□ 0.7
RNF43Q68DV7 DUSP5P1-201ENST00000441325 1139 ntBASIC19.42■□□□□ 0.7
RNF43Q68DV7 COX11P1-201ENST00000489116 835 ntBASIC19.42■□□□□ 0.7
RNF43Q68DV7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 AP000997.3-201ENST00000623333 2250 ntBASIC19.42■□□□□ 0.7
RNF43Q68DV7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF43Q68DV7 AC006333.2-201ENST00000607957 2099 ntBASIC19.42■□□□□ 0.7
RNF43Q68DV7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF43Q68DV7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms