Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 POU5F1P3-201ENST00000428824 1078 ntBASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 AC004264.1-201ENST00000608354 794 ntBASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 NBPF21P-201ENST00000425093 1451 ntBASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 AC012313.1-201ENST00000593393 3059 ntBASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.7□□□□□ -0.38
LINC00242Q5T6M2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 AC006970.2-201ENST00000450065 779 ntBASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00242Q5T6M2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 GUSBP6-202ENST00000438529 1198 ntBASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 TSPY6P-201ENST00000448518 926 ntBASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00242Q5T6M2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms