Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 AL353692.3-201ENST00000407031 1396 ntBASIC10.1□□□□□ -0.79
UBR4Q5T4S7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 KRT17P7-201ENST00000451704 1104 ntBASIC10.1□□□□□ -0.79
UBR4Q5T4S7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 AC022145.2-201ENST00000598203 171 ntBASIC10.1□□□□□ -0.79
UBR4Q5T4S7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 IGHV3-72-202ENST00000621503 303 ntBASIC10.1□□□□□ -0.79
UBR4Q5T4S7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBR4Q5T4S7 AL355334.1-201ENST00000417713 215 ntBASIC10.09□□□□□ -0.79
UBR4Q5T4S7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC10.09□□□□□ -0.79
UBR4Q5T4S7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AC068587.9-201ENST00000641814 219 ntBASIC10.09□□□□□ -0.79
UBR4Q5T4S7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AC004461.1-201ENST00000412461 403 ntBASIC10.09□□□□□ -0.79
UBR4Q5T4S7 MCCD1P1-208ENST00000445732 328 ntBASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 REXO1L6P-201ENST00000603433 1515 ntBASIC10.09□□□□□ -0.79
UBR4Q5T4S7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 FAM86GP-201ENST00000448322 971 ntBASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 MIR3180-5-201ENST00000583743 153 ntBASIC10.09□□□□□ -0.79
UBR4Q5T4S7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBR4Q5T4S7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 AC079776.1-201ENST00000401540 1152 ntBASIC10.08□□□□□ -0.8
UBR4Q5T4S7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms