Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDH17Q12864 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CDH17Q12864 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH17Q12864 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CDH17Q12864 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDH17Q12864 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
CDH17Q12864 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 ABALON-201ENST00000629058 1903 ntBASIC18.75■□□□□ 0.59
CDH17Q12864 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH17Q12864 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH17Q12864 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.75■□□□□ 0.59
CDH17Q12864 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.75■□□□□ 0.59
CDH17Q12864 AL390955.1-201ENST00000428694 934 ntBASIC18.75■□□□□ 0.59
CDH17Q12864 CCR12P-201ENST00000446203 998 ntBASIC18.75■□□□□ 0.59
CDH17Q12864 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.75■□□□□ 0.59
CDH17Q12864 AP003041.3-201ENST00000527151 707 ntBASIC18.75■□□□□ 0.59
CDH17Q12864 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH17Q12864 AL353719.1-201ENST00000566847 864 ntBASIC18.75■□□□□ 0.59
CDH17Q12864 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH17Q12864 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.75■□□□□ 0.59
CDH17Q12864 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH17Q12864 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDH17Q12864 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDH17Q12864 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH17Q12864 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDH17Q12864 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH17Q12864 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 BCL2-203ENST00000589955 5011 ntBASIC18.74■□□□□ 0.59
CDH17Q12864 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH17Q12864 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CDH17Q12864 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH17Q12864 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH17Q12864 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH17Q12864 AL355075.4-201ENST00000554988 638 ntBASIC18.74■□□□□ 0.59
CDH17Q12864 MIR4497-201ENST00000583208 89 ntBASIC18.74■□□□□ 0.59
CDH17Q12864 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH17Q12864 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH17Q12864 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH17Q12864 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH17Q12864 AC036111.1-201ENST00000533973 1582 ntBASIC18.73■□□□□ 0.59
CDH17Q12864 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 MIR1238-201ENST00000408483 83 ntBASIC18.73■□□□□ 0.59
CDH17Q12864 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH17Q12864 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH17Q12864 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH17Q12864 C2orf69P3-201ENST00000565542 1120 ntBASIC18.73■□□□□ 0.59
CDH17Q12864 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH17Q12864 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH17Q12864 AC092338.2-201ENST00000568827 1415 ntBASIC18.73■□□□□ 0.59
CDH17Q12864 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH17Q12864 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH17Q12864 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH17Q12864 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDH17Q12864 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH17Q12864 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH17Q12864 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDH17Q12864 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH17Q12864 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDH17Q12864 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
CDH17Q12864 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH17Q12864 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH17Q12864 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms