Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 AC097493.4-201ENST00000641197 219 ntBASIC19.81■□□□□ 0.76
GCNT1Q02742 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GCNT1Q02742 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GCNT1Q02742 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
GCNT1Q02742 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GCNT1Q02742 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.8■□□□□ 0.76
GCNT1Q02742 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GCNT1Q02742 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 AL354751.1-201ENST00000412768 1863 ntBASIC19.8■□□□□ 0.76
GCNT1Q02742 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GCNT1Q02742 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GCNT1Q02742 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.8■□□□□ 0.76
GCNT1Q02742 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GCNT1Q02742 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GCNT1Q02742 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.8■□□□□ 0.76
GCNT1Q02742 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GCNT1Q02742 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
GCNT1Q02742 SDHAP2-201ENST00000455183 2001 ntBASIC19.8■□□□□ 0.76
GCNT1Q02742 AC009102.3-201ENST00000623118 1491 ntBASIC19.79■□□□□ 0.76
GCNT1Q02742 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.79■□□□□ 0.76
GCNT1Q02742 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GCNT1Q02742 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.79■□□□□ 0.76
GCNT1Q02742 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.79■□□□□ 0.76
GCNT1Q02742 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
GCNT1Q02742 SLC25A3P1-201ENST00000443844 931 ntBASIC19.79■□□□□ 0.76
GCNT1Q02742 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.79■□□□□ 0.76
GCNT1Q02742 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.79■□□□□ 0.76
GCNT1Q02742 AC009065.1-201ENST00000564055 1225 ntBASIC19.79■□□□□ 0.76
GCNT1Q02742 AL138966.2-201ENST00000621997 464 ntBASIC19.79■□□□□ 0.76
GCNT1Q02742 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.79■□□□□ 0.76
GCNT1Q02742 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.79■□□□□ 0.76
GCNT1Q02742 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.79■□□□□ 0.76
GCNT1Q02742 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.79■□□□□ 0.76
GCNT1Q02742 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.79■□□□□ 0.76
GCNT1Q02742 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GCNT1Q02742 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GCNT1Q02742 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
GCNT1Q02742 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.78■□□□□ 0.76
GCNT1Q02742 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.78■□□□□ 0.76
GCNT1Q02742 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 AP000523.1-201ENST00000398242 1049 ntBASIC19.78■□□□□ 0.76
GCNT1Q02742 SEC1P-202ENST00000473944 940 ntBASIC19.78■□□□□ 0.76
GCNT1Q02742 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.78■□□□□ 0.76
GCNT1Q02742 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.78■□□□□ 0.76
GCNT1Q02742 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
GCNT1Q02742 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GCNT1Q02742 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
GCNT1Q02742 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GCNT1Q02742 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.77■□□□□ 0.76
GCNT1Q02742 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GCNT1Q02742 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms