Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.06■■□□□ 1.12
CNTNAP1P78357 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.06■■□□□ 1.12
CNTNAP1P78357 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.06■■□□□ 1.12
CNTNAP1P78357 AC068587.9-201ENST00000641814 219 ntBASIC22.06■■□□□ 1.12
CNTNAP1P78357 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
CNTNAP1P78357 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNTNAP1P78357 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.06■■□□□ 1.12
CNTNAP1P78357 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CNTNAP1P78357 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 POM121L3P-201ENST00000419331 1163 ntBASIC22.05■■□□□ 1.12
CNTNAP1P78357 FAM8A3P-201ENST00000427218 844 ntBASIC22.05■■□□□ 1.12
CNTNAP1P78357 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 IGHV3-22-201ENST00000520721 359 ntBASIC22.05■■□□□ 1.12
CNTNAP1P78357 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 AC124864.1-201ENST00000623408 392 ntBASIC22.05■■□□□ 1.12
CNTNAP1P78357 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNTNAP1P78357 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.05■■□□□ 1.12
CNTNAP1P78357 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CNTNAP1P78357 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CNTNAP1P78357 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 HNRNPDP1-201ENST00000439535 754 ntBASIC22.04■■□□□ 1.12
CNTNAP1P78357 MINOS1P3-201ENST00000457048 203 ntBASIC22.04■■□□□ 1.12
CNTNAP1P78357 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.04■■□□□ 1.12
CNTNAP1P78357 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.04■■□□□ 1.12
CNTNAP1P78357 AC092364.2-202ENST00000597012 1073 ntBASIC22.04■■□□□ 1.12
CNTNAP1P78357 AL591684.3-201ENST00000605187 298 ntBASIC22.04■■□□□ 1.12
CNTNAP1P78357 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 FP475955.4-201ENST00000623131 1990 ntBASIC22.04■■□□□ 1.12
CNTNAP1P78357 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.04■■□□□ 1.12
CNTNAP1P78357 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.04■■□□□ 1.12
CNTNAP1P78357 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.04■■□□□ 1.12
CNTNAP1P78357 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CNTNAP1P78357 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.04■■□□□ 1.12
CNTNAP1P78357 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 AC141586.3-201ENST00000562166 1838 ntBASIC22.03■■□□□ 1.12
CNTNAP1P78357 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.03■■□□□ 1.12
CNTNAP1P78357 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 KRT18P28-201ENST00000453838 1332 ntBASIC22.03■■□□□ 1.12
CNTNAP1P78357 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CNTNAP1P78357 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNTNAP1P78357 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.02■■□□□ 1.12
CNTNAP1P78357 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP1P78357 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.02■■□□□ 1.12
CNTNAP1P78357 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP1P78357 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP1P78357 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.02■■□□□ 1.12
CNTNAP1P78357 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP1P78357 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.02■■□□□ 1.12
CNTNAP1P78357 GUSBP12-201ENST00000513727 720 ntBASIC22.02■■□□□ 1.12
CNTNAP1P78357 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNTNAP1P78357 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.02■■□□□ 1.12
CNTNAP1P78357 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.02■■□□□ 1.12
CNTNAP1P78357 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms