Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
EIF4A1P60842 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.68■■□□□ 1.38
EIF4A1P60842 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.68■■□□□ 1.38
EIF4A1P60842 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.68■■□□□ 1.38
EIF4A1P60842 AC090616.6-201ENST00000582640 721 ntBASIC23.68■■□□□ 1.38
EIF4A1P60842 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.68■■□□□ 1.38
EIF4A1P60842 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.68■■□□□ 1.38
EIF4A1P60842 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.68■■□□□ 1.38
EIF4A1P60842 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.68■■□□□ 1.38
EIF4A1P60842 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
EIF4A1P60842 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
EIF4A1P60842 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.68■■□□□ 1.38
EIF4A1P60842 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
EIF4A1P60842 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
EIF4A1P60842 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
EIF4A1P60842 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
EIF4A1P60842 AL353692.3-201ENST00000407031 1396 ntBASIC23.67■■□□□ 1.38
EIF4A1P60842 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EIF4A1P60842 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.67■■□□□ 1.38
EIF4A1P60842 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.67■■□□□ 1.38
EIF4A1P60842 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
EIF4A1P60842 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EIF4A1P60842 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
EIF4A1P60842 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
EIF4A1P60842 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.67■■□□□ 1.38
EIF4A1P60842 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.67■■□□□ 1.38
EIF4A1P60842 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.67■■□□□ 1.38
EIF4A1P60842 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EIF4A1P60842 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
EIF4A1P60842 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
EIF4A1P60842 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
EIF4A1P60842 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
EIF4A1P60842 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
EIF4A1P60842 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.67■■□□□ 1.38
EIF4A1P60842 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
EIF4A1P60842 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EIF4A1P60842 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EIF4A1P60842 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EIF4A1P60842 TOB2P1-201ENST00000469761 992 ntBASIC23.66■■□□□ 1.38
EIF4A1P60842 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
EIF4A1P60842 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.66■■□□□ 1.38
EIF4A1P60842 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.66■■□□□ 1.38
EIF4A1P60842 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.66■■□□□ 1.38
EIF4A1P60842 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
EIF4A1P60842 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
EIF4A1P60842 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EIF4A1P60842 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.66■■□□□ 1.38
EIF4A1P60842 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
EIF4A1P60842 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.65■■□□□ 1.38
EIF4A1P60842 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
EIF4A1P60842 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.65■■□□□ 1.38
EIF4A1P60842 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.65■■□□□ 1.38
EIF4A1P60842 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
EIF4A1P60842 LINC00265-3P-201ENST00000447588 903 ntBASIC23.65■■□□□ 1.38
EIF4A1P60842 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.65■■□□□ 1.38
EIF4A1P60842 IGHV3-41-201ENST00000613121 348 ntBASIC23.65■■□□□ 1.38
EIF4A1P60842 AC004263.2-201ENST00000617183 678 ntBASIC23.65■■□□□ 1.38
EIF4A1P60842 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.65■■□□□ 1.38
EIF4A1P60842 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
EIF4A1P60842 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
EIF4A1P60842 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
EIF4A1P60842 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
EIF4A1P60842 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
EIF4A1P60842 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.64■■□□□ 1.38
EIF4A1P60842 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
EIF4A1P60842 NUS1P1-201ENST00000446295 882 ntBASIC23.64■■□□□ 1.37
EIF4A1P60842 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
EIF4A1P60842 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.64■■□□□ 1.37
EIF4A1P60842 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.64■■□□□ 1.37
EIF4A1P60842 AL592071.1-201ENST00000611956 408 ntBASIC23.64■■□□□ 1.37
EIF4A1P60842 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
EIF4A1P60842 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.37
EIF4A1P60842 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
EIF4A1P60842 AL024508.2-201ENST00000607749 1894 ntBASIC23.64■■□□□ 1.37
EIF4A1P60842 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
EIF4A1P60842 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.63■■□□□ 1.37
EIF4A1P60842 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 AP000867.3-201ENST00000524675 377 ntBASIC23.63■■□□□ 1.37
EIF4A1P60842 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.63■■□□□ 1.37
EIF4A1P60842 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.63■■□□□ 1.37
EIF4A1P60842 PRELID1P1-202ENST00000567272 903 ntBASIC23.63■■□□□ 1.37
EIF4A1P60842 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.63■■□□□ 1.37
EIF4A1P60842 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.63■■□□□ 1.37
EIF4A1P60842 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.63■■□□□ 1.37
EIF4A1P60842 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
EIF4A1P60842 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
EIF4A1P60842 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.63■■□□□ 1.37
EIF4A1P60842 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.62■■□□□ 1.37
EIF4A1P60842 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms