Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DEFA3P59666 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.3■□□□□ 0.2
DEFA3P59666 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DEFA3P59666 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
DEFA3P59666 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
DEFA3P59666 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
DEFA3P59666 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.3■□□□□ 0.2
DEFA3P59666 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DEFA3P59666 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
DEFA3P59666 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.3■□□□□ 0.2
DEFA3P59666 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DEFA3P59666 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA3P59666 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
DEFA3P59666 FLJ13224-201ENST00000313737 1514 ntBASIC16.29■□□□□ 0.2
DEFA3P59666 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
DEFA3P59666 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.29■□□□□ 0.2
DEFA3P59666 PP12613-201ENST00000424958 2230 ntBASIC16.29■□□□□ 0.2
DEFA3P59666 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.29■□□□□ 0.2
DEFA3P59666 AC126544.1-201ENST00000580842 1059 ntBASIC16.29■□□□□ 0.2
DEFA3P59666 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.29■□□□□ 0.2
DEFA3P59666 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.29■□□□□ 0.2
DEFA3P59666 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.29■□□□□ 0.2
DEFA3P59666 LINC01126-201ENST00000623515 1646 ntBASIC16.29■□□□□ 0.2
DEFA3P59666 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DEFA3P59666 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.29■□□□□ 0.2
DEFA3P59666 FLJ16779-201ENST00000612722 7638 ntBASIC16.29■□□□□ 0.2
DEFA3P59666 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA3P59666 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.29■□□□□ 0.2
DEFA3P59666 AC093677.2-201ENST00000600169 1863 ntBASIC16.29■□□□□ 0.2
DEFA3P59666 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.29■□□□□ 0.2
DEFA3P59666 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
DEFA3P59666 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DEFA3P59666 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.28■□□□□ 0.2
DEFA3P59666 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA3P59666 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA3P59666 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DEFA3P59666 AC239859.2-201ENST00000444165 318 ntBASIC16.28■□□□□ 0.2
DEFA3P59666 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA3P59666 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA3P59666 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA3P59666 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.28■□□□□ 0.2
DEFA3P59666 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DEFA3P59666 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DEFA3P59666 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DEFA3P59666 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 AC104417.2-201ENST00000562989 1793 ntBASIC16.28■□□□□ 0.2
DEFA3P59666 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA3P59666 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
DEFA3P59666 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.27■□□□□ 0.2
DEFA3P59666 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.27■□□□□ 0.2
DEFA3P59666 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DEFA3P59666 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DEFA3P59666 AL596257.1-201ENST00000641463 2694 ntBASIC16.27■□□□□ 0.2
DEFA3P59666 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms