Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
WNT3AP56704 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
WNT3AP56704 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.74■□□□□ 0.59
WNT3AP56704 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
WNT3AP56704 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
WNT3AP56704 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.74■□□□□ 0.59
WNT3AP56704 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.74■□□□□ 0.59
WNT3AP56704 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
WNT3AP56704 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
WNT3AP56704 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
WNT3AP56704 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
WNT3AP56704 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
WNT3AP56704 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
WNT3AP56704 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.73■□□□□ 0.59
WNT3AP56704 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.73■□□□□ 0.59
WNT3AP56704 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.73■□□□□ 0.59
WNT3AP56704 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.73■□□□□ 0.59
WNT3AP56704 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.73■□□□□ 0.59
WNT3AP56704 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
WNT3AP56704 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.73■□□□□ 0.59
WNT3AP56704 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.73■□□□□ 0.59
WNT3AP56704 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
WNT3AP56704 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.73■□□□□ 0.59
WNT3AP56704 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
WNT3AP56704 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.73■□□□□ 0.59
WNT3AP56704 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
WNT3AP56704 KRT8P7-201ENST00000533003 1432 ntBASIC18.73■□□□□ 0.59
WNT3AP56704 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.73■□□□□ 0.59
WNT3AP56704 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.73■□□□□ 0.59
WNT3AP56704 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.73■□□□□ 0.59
WNT3AP56704 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
WNT3AP56704 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
WNT3AP56704 AC009947.2-201ENST00000444014 672 ntBASIC18.72■□□□□ 0.59
WNT3AP56704 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 AC133561.5-201ENST00000635547 218 ntBASIC18.72■□□□□ 0.59
WNT3AP56704 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
WNT3AP56704 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
WNT3AP56704 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.72■□□□□ 0.59
WNT3AP56704 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.72■□□□□ 0.59
WNT3AP56704 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
WNT3AP56704 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
WNT3AP56704 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
WNT3AP56704 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
WNT3AP56704 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
WNT3AP56704 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.71■□□□□ 0.59
WNT3AP56704 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 AL512604.3-201ENST00000569583 964 ntBASIC18.71■□□□□ 0.59
WNT3AP56704 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 AC112497.1-201ENST00000624824 639 ntBASIC18.71■□□□□ 0.59
WNT3AP56704 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.71■□□□□ 0.59
WNT3AP56704 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.71■□□□□ 0.59
WNT3AP56704 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
WNT3AP56704 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms