Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PEX3P56589 MYLKP1-201ENST00000509077 1580 ntBASIC20.42■□□□□ 0.86
PEX3P56589 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PEX3P56589 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PEX3P56589 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PEX3P56589 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PEX3P56589 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.42■□□□□ 0.86
PEX3P56589 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PEX3P56589 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PEX3P56589 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PEX3P56589 STARP1-201ENST00000397973 869 ntBASIC20.42■□□□□ 0.86
PEX3P56589 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.42■□□□□ 0.86
PEX3P56589 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.42■□□□□ 0.86
PEX3P56589 AC034232.1-201ENST00000506026 1064 ntBASIC20.42■□□□□ 0.86
PEX3P56589 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PEX3P56589 LINC01238-205ENST00000567549 1107 ntBASIC20.42■□□□□ 0.86
PEX3P56589 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PEX3P56589 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
PEX3P56589 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
PEX3P56589 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.42■□□□□ 0.86
PEX3P56589 AC005082.1-201ENST00000413042 2259 ntBASIC20.42■□□□□ 0.86
PEX3P56589 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PEX3P56589 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PEX3P56589 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PEX3P56589 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PEX3P56589 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
PEX3P56589 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.41■□□□□ 0.86
PEX3P56589 MYC-208ENST00000641036 567 ntBASIC20.41■□□□□ 0.86
PEX3P56589 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.41■□□□□ 0.86
PEX3P56589 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PEX3P56589 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PEX3P56589 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.41■□□□□ 0.86
PEX3P56589 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.41■□□□□ 0.86
PEX3P56589 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PEX3P56589 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.41■□□□□ 0.86
PEX3P56589 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.41■□□□□ 0.86
PEX3P56589 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.41■□□□□ 0.86
PEX3P56589 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.41■□□□□ 0.86
PEX3P56589 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PEX3P56589 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PEX3P56589 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
PEX3P56589 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PEX3P56589 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.4■□□□□ 0.86
PEX3P56589 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
PEX3P56589 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.4■□□□□ 0.86
PEX3P56589 KRT18P35-201ENST00000510488 1269 ntBASIC20.4■□□□□ 0.86
PEX3P56589 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 AC126763.1-201ENST00000552015 2118 ntBASIC20.4■□□□□ 0.86
PEX3P56589 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.4■□□□□ 0.86
PEX3P56589 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.4■□□□□ 0.86
PEX3P56589 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.4■□□□□ 0.86
PEX3P56589 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PEX3P56589 AL445228.2-201ENST00000605589 952 ntBASIC20.4■□□□□ 0.86
PEX3P56589 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PEX3P56589 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PEX3P56589 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PEX3P56589 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.39■□□□□ 0.86
PEX3P56589 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.39■□□□□ 0.86
PEX3P56589 AL163051.1-201ENST00000569214 1512 ntBASIC20.39■□□□□ 0.85
PEX3P56589 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.39■□□□□ 0.85
PEX3P56589 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.39■□□□□ 0.85
PEX3P56589 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.39■□□□□ 0.85
PEX3P56589 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PEX3P56589 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PEX3P56589 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PEX3P56589 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms