Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ATXN3P54252 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.92■□□□□ 0.62
ATXN3P54252 LINC01311-201ENST00000565162 1445 ntBASIC18.92■□□□□ 0.62
ATXN3P54252 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATXN3P54252 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.92■□□□□ 0.62
ATXN3P54252 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
ATXN3P54252 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.92■□□□□ 0.62
ATXN3P54252 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.92■□□□□ 0.62
ATXN3P54252 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.92■□□□□ 0.62
ATXN3P54252 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.92■□□□□ 0.62
ATXN3P54252 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.92■□□□□ 0.62
ATXN3P54252 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
ATXN3P54252 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.92■□□□□ 0.62
ATXN3P54252 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ATXN3P54252 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.92■□□□□ 0.62
ATXN3P54252 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.92■□□□□ 0.62
ATXN3P54252 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.92■□□□□ 0.62
ATXN3P54252 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATXN3P54252 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.92■□□□□ 0.62
ATXN3P54252 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.92■□□□□ 0.62
ATXN3P54252 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ATXN3P54252 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ATXN3P54252 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.91■□□□□ 0.62
ATXN3P54252 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.91■□□□□ 0.62
ATXN3P54252 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.91■□□□□ 0.62
ATXN3P54252 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 NEK4P2-201ENST00000580004 1012 ntBASIC18.91■□□□□ 0.62
ATXN3P54252 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ATXN3P54252 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.91■□□□□ 0.62
ATXN3P54252 AC012313.10-201ENST00000623509 926 ntBASIC18.91■□□□□ 0.62
ATXN3P54252 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
ATXN3P54252 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATXN3P54252 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.91■□□□□ 0.62
ATXN3P54252 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.9■□□□□ 0.62
ATXN3P54252 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ATXN3P54252 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.9■□□□□ 0.62
ATXN3P54252 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.9■□□□□ 0.62
ATXN3P54252 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 AC104581.1-202ENST00000635932 2618 ntBASIC18.9■□□□□ 0.62
ATXN3P54252 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.9■□□□□ 0.62
ATXN3P54252 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.9■□□□□ 0.62
ATXN3P54252 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.9■□□□□ 0.62
ATXN3P54252 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATXN3P54252 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATXN3P54252 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATXN3P54252 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATXN3P54252 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
ATXN3P54252 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
ATXN3P54252 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 STARP1-201ENST00000397973 869 ntBASIC18.89■□□□□ 0.61
ATXN3P54252 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ATXN3P54252 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.89■□□□□ 0.61
ATXN3P54252 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.89■□□□□ 0.61
ATXN3P54252 PRELID1P1-202ENST00000567272 903 ntBASIC18.89■□□□□ 0.61
ATXN3P54252 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.89■□□□□ 0.61
ATXN3P54252 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.89■□□□□ 0.61
ATXN3P54252 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ATXN3P54252 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms