Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.72■□□□□ 0.59
LIMK2P53671 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LIMK2P53671 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.72■□□□□ 0.59
LIMK2P53671 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.72■□□□□ 0.59
LIMK2P53671 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.72■□□□□ 0.59
LIMK2P53671 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LIMK2P53671 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.71■□□□□ 0.59
LIMK2P53671 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 AC026471.1-201ENST00000564629 3026 ntBASIC18.71■□□□□ 0.59
LIMK2P53671 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.71■□□□□ 0.59
LIMK2P53671 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.71■□□□□ 0.59
LIMK2P53671 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.71■□□□□ 0.59
LIMK2P53671 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.71■□□□□ 0.59
LIMK2P53671 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LIMK2P53671 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LIMK2P53671 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.71■□□□□ 0.59
LIMK2P53671 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LIMK2P53671 AC004951.3-201ENST00000418645 1148 ntBASIC18.71■□□□□ 0.59
LIMK2P53671 AC091390.4-202ENST00000476426 537 ntBASIC18.71■□□□□ 0.59
LIMK2P53671 SLC25A1P4-201ENST00000567977 778 ntBASIC18.71■□□□□ 0.59
LIMK2P53671 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.71■□□□□ 0.59
LIMK2P53671 AC011298.2-201ENST00000617989 482 ntBASIC18.71■□□□□ 0.59
LIMK2P53671 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LIMK2P53671 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.71■□□□□ 0.59
LIMK2P53671 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.71■□□□□ 0.59
LIMK2P53671 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.71■□□□□ 0.59
LIMK2P53671 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LIMK2P53671 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LIMK2P53671 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LIMK2P53671 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
LIMK2P53671 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.71■□□□□ 0.58
LIMK2P53671 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 NOC2LP2-201ENST00000407594 1944 ntBASIC18.7■□□□□ 0.58
LIMK2P53671 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LIMK2P53671 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.7■□□□□ 0.58
LIMK2P53671 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LIMK2P53671 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
LIMK2P53671 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.7■□□□□ 0.58
LIMK2P53671 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.7■□□□□ 0.58
LIMK2P53671 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.7■□□□□ 0.58
LIMK2P53671 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.7■□□□□ 0.58
LIMK2P53671 AC128688.1-201ENST00000487626 519 ntBASIC18.7■□□□□ 0.58
LIMK2P53671 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.7■□□□□ 0.58
LIMK2P53671 LETM1P2-201ENST00000597330 2178 ntBASIC18.7■□□□□ 0.58
LIMK2P53671 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
LIMK2P53671 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIMK2P53671 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LIMK2P53671 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
LIMK2P53671 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.69■□□□□ 0.58
LIMK2P53671 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.69■□□□□ 0.58
LIMK2P53671 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.69■□□□□ 0.58
LIMK2P53671 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
LIMK2P53671 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.69■□□□□ 0.58
LIMK2P53671 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.69■□□□□ 0.58
LIMK2P53671 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.69■□□□□ 0.58
LIMK2P53671 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.69■□□□□ 0.58
LIMK2P53671 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIMK2P53671 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.69■□□□□ 0.58
LIMK2P53671 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms