Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR2JP52435 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.77■□□□□ 0.44
POLR2JP52435 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR2JP52435 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.77■□□□□ 0.44
POLR2JP52435 AC138028.4-201ENST00000564984 1845 ntBASIC17.77■□□□□ 0.44
POLR2JP52435 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
POLR2JP52435 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
POLR2JP52435 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
POLR2JP52435 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
POLR2JP52435 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
POLR2JP52435 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
POLR2JP52435 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
POLR2JP52435 AC091390.4-202ENST00000476426 537 ntBASIC17.77■□□□□ 0.44
POLR2JP52435 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR2JP52435 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR2JP52435 RNA5SP413-201ENST00000516373 109 ntBASIC17.77■□□□□ 0.44
POLR2JP52435 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.77■□□□□ 0.44
POLR2JP52435 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2JP52435 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
POLR2JP52435 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
POLR2JP52435 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.77■□□□□ 0.43
POLR2JP52435 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
POLR2JP52435 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR2JP52435 MYLKP1-201ENST00000509077 1580 ntBASIC17.76■□□□□ 0.43
POLR2JP52435 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 AL355802.2-201ENST00000402069 882 ntBASIC17.76■□□□□ 0.43
POLR2JP52435 NIFKP9-201ENST00000419265 221 ntBASIC17.76■□□□□ 0.43
POLR2JP52435 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.76■□□□□ 0.43
POLR2JP52435 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
POLR2JP52435 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
POLR2JP52435 AC134043.2-201ENST00000624206 2238 ntBASIC17.76■□□□□ 0.43
POLR2JP52435 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.76■□□□□ 0.43
POLR2JP52435 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.76■□□□□ 0.43
POLR2JP52435 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
POLR2JP52435 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 GNAS-203ENST00000306120 1878 ntBASIC17.75■□□□□ 0.43
POLR2JP52435 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 HTR7P1-201ENST00000538670 1336 ntBASIC17.75■□□□□ 0.43
POLR2JP52435 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
POLR2JP52435 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
POLR2JP52435 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.75■□□□□ 0.43
POLR2JP52435 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
POLR2JP52435 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 SLC25A6P5-201ENST00000435663 894 ntBASIC17.75■□□□□ 0.43
POLR2JP52435 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.75■□□□□ 0.43
POLR2JP52435 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
POLR2JP52435 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR2JP52435 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR2JP52435 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR2JP52435 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
POLR2JP52435 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR2JP52435 REXO1L9P-201ENST00000604264 2108 ntBASIC17.74■□□□□ 0.43
POLR2JP52435 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR2JP52435 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR2JP52435 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms