Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CDR1P51861 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.28■□□□□ 0.84
CDR1P51861 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
CDR1P51861 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CDR1P51861 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDR1P51861 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.28■□□□□ 0.84
CDR1P51861 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDR1P51861 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDR1P51861 AL138781.2-201ENST00000617896 1843 ntBASIC20.28■□□□□ 0.84
CDR1P51861 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDR1P51861 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.28■□□□□ 0.84
CDR1P51861 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.28■□□□□ 0.84
CDR1P51861 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.28■□□□□ 0.84
CDR1P51861 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDR1P51861 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDR1P51861 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.28■□□□□ 0.84
CDR1P51861 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDR1P51861 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDR1P51861 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.28■□□□□ 0.84
CDR1P51861 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDR1P51861 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
CDR1P51861 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDR1P51861 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDR1P51861 AC005332.8-201ENST00000622750 2735 ntBASIC20.27■□□□□ 0.84
CDR1P51861 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDR1P51861 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDR1P51861 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDR1P51861 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.27■□□□□ 0.84
CDR1P51861 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDR1P51861 TSPY23P-201ENST00000440136 739 ntBASIC20.27■□□□□ 0.84
CDR1P51861 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CDR1P51861 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDR1P51861 WWOX-216ENST00000569818 525 ntBASIC20.27■□□□□ 0.84
CDR1P51861 AC116562.4-202ENST00000641738 218 ntBASIC20.27■□□□□ 0.84
CDR1P51861 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDR1P51861 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDR1P51861 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDR1P51861 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.27■□□□□ 0.84
CDR1P51861 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDR1P51861 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CDR1P51861 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.83
CDR1P51861 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDR1P51861 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.27■□□□□ 0.83
CDR1P51861 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.27■□□□□ 0.83
CDR1P51861 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CDR1P51861 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDR1P51861 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDR1P51861 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDR1P51861 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.27■□□□□ 0.83
CDR1P51861 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CDR1P51861 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.26■□□□□ 0.83
CDR1P51861 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDR1P51861 ARMC10P1-201ENST00000313754 855 ntBASIC20.26■□□□□ 0.83
CDR1P51861 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.26■□□□□ 0.83
CDR1P51861 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDR1P51861 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
CDR1P51861 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 AP003041.3-201ENST00000527151 707 ntBASIC20.26■□□□□ 0.83
CDR1P51861 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.26■□□□□ 0.83
CDR1P51861 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
CDR1P51861 AL023803.3-201ENST00000615559 522 ntBASIC20.26■□□□□ 0.83
CDR1P51861 FZD10-202ENST00000539839 3282 ntBASIC20.26■□□□□ 0.83
CDR1P51861 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDR1P51861 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.26■□□□□ 0.83
CDR1P51861 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CDR1P51861 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDR1P51861 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 AC007613.1-201ENST00000572811 2597 ntBASIC20.26■□□□□ 0.83
CDR1P51861 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.26■□□□□ 0.83
CDR1P51861 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDR1P51861 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.25■□□□□ 0.83
CDR1P51861 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.25■□□□□ 0.83
CDR1P51861 AC128688.1-201ENST00000487626 519 ntBASIC20.25■□□□□ 0.83
CDR1P51861 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.25■□□□□ 0.83
CDR1P51861 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.25■□□□□ 0.83
CDR1P51861 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CDR1P51861 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
CDR1P51861 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDR1P51861 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms