Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCN3P51790 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLCN3P51790 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN3P51790 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN3P51790 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLCN3P51790 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCN3P51790 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN3P51790 CHCHD2P8-201ENST00000429873 447 ntBASIC20.36■□□□□ 0.85
CLCN3P51790 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLCN3P51790 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLCN3P51790 AC005332.3-201ENST00000589904 676 ntBASIC20.36■□□□□ 0.85
CLCN3P51790 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.36■□□□□ 0.85
CLCN3P51790 AL121894.2-201ENST00000602977 491 ntBASIC20.36■□□□□ 0.85
CLCN3P51790 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN3P51790 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCN3P51790 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN3P51790 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN3P51790 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCN3P51790 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN3P51790 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLCN3P51790 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN3P51790 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCN3P51790 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CLCN3P51790 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCN3P51790 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLCN3P51790 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN3P51790 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLCN3P51790 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN3P51790 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 AL499627.1-201ENST00000569373 2188 ntBASIC20.35■□□□□ 0.85
CLCN3P51790 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCN3P51790 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 AP000593.1-201ENST00000393668 712 ntBASIC20.35■□□□□ 0.85
CLCN3P51790 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN3P51790 AC009065.1-201ENST00000564055 1225 ntBASIC20.35■□□□□ 0.85
CLCN3P51790 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCN3P51790 AL390719.2-201ENST00000606993 987 ntBASIC20.35■□□□□ 0.85
CLCN3P51790 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLCN3P51790 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
CLCN3P51790 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CLCN3P51790 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLCN3P51790 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCN3P51790 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN3P51790 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.34■□□□□ 0.85
CLCN3P51790 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN3P51790 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.34■□□□□ 0.85
CLCN3P51790 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN3P51790 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.34■□□□□ 0.85
CLCN3P51790 AC024563.2-201ENST00000603282 481 ntBASIC20.34■□□□□ 0.85
CLCN3P51790 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.34■□□□□ 0.85
CLCN3P51790 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN3P51790 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.34■□□□□ 0.85
CLCN3P51790 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CLCN3P51790 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN3P51790 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN3P51790 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN3P51790 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN3P51790 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CLCN3P51790 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN3P51790 KRT18P1-202ENST00000452408 1331 ntBASIC20.33■□□□□ 0.85
CLCN3P51790 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN3P51790 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CLCN3P51790 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN3P51790 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN3P51790 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN3P51790 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN3P51790 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN3P51790 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCN3P51790 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN3P51790 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN3P51790 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
CLCN3P51790 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN3P51790 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN3P51790 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.33■□□□□ 0.84
CLCN3P51790 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN3P51790 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLCN3P51790 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN3P51790 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN3P51790 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN3P51790 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms