Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC1P51610 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC1P51610 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HCFC1P51610 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 NUS1P2-201ENST00000417358 873 ntBASIC16.14■□□□□ 0.17
HCFC1P51610 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC1P51610 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC1P51610 AC006538.3-201ENST00000612495 578 ntBASIC16.14■□□□□ 0.17
HCFC1P51610 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HCFC1P51610 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.14■□□□□ 0.17
HCFC1P51610 AF228730.7-201ENST00000641842 219 ntBASIC16.14■□□□□ 0.17
HCFC1P51610 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
HCFC1P51610 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC1P51610 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HCFC1P51610 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC1P51610 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC1P51610 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC1P51610 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC1P51610 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HCFC1P51610 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC1P51610 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HCFC1P51610 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HCFC1P51610 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HCFC1P51610 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.13■□□□□ 0.17
HCFC1P51610 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1P51610 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 AC079776.4-201ENST00000511039 504 ntBASIC16.12■□□□□ 0.17
HCFC1P51610 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.12■□□□□ 0.17
HCFC1P51610 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.12■□□□□ 0.17
HCFC1P51610 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.12■□□□□ 0.17
HCFC1P51610 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.12■□□□□ 0.17
HCFC1P51610 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.12■□□□□ 0.17
HCFC1P51610 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.12■□□□□ 0.17
HCFC1P51610 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.12■□□□□ 0.17
HCFC1P51610 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HCFC1P51610 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.12■□□□□ 0.17
HCFC1P51610 AC008608.2-201ENST00000606089 416 ntBASIC16.12■□□□□ 0.17
HCFC1P51610 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HCFC1P51610 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
HCFC1P51610 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.12■□□□□ 0.17
HCFC1P51610 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.12■□□□□ 0.17
HCFC1P51610 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1P51610 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.12■□□□□ 0.17
HCFC1P51610 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
HCFC1P51610 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HCFC1P51610 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1P51610 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms