Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLK2P49760 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLK2P49760 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.98■□□□□ 0.95
CLK2P49760 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.97■□□□□ 0.95
CLK2P49760 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.97■□□□□ 0.95
CLK2P49760 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CLK2P49760 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CLK2P49760 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.97■□□□□ 0.95
CLK2P49760 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.97■□□□□ 0.95
CLK2P49760 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.97■□□□□ 0.95
CLK2P49760 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
CLK2P49760 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.97■□□□□ 0.95
CLK2P49760 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.97■□□□□ 0.95
CLK2P49760 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.97■□□□□ 0.95
CLK2P49760 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLK2P49760 AL024508.2-201ENST00000607749 1894 ntBASIC20.96■□□□□ 0.95
CLK2P49760 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.96■□□□□ 0.95
CLK2P49760 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.96■□□□□ 0.95
CLK2P49760 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLK2P49760 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLK2P49760 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.96■□□□□ 0.95
CLK2P49760 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.96■□□□□ 0.95
CLK2P49760 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.96■□□□□ 0.95
CLK2P49760 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.96■□□□□ 0.95
CLK2P49760 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.96■□□□□ 0.95
CLK2P49760 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.96■□□□□ 0.95
CLK2P49760 AL358472.4-201ENST00000633140 710 ntBASIC20.96■□□□□ 0.95
CLK2P49760 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.96■□□□□ 0.95
CLK2P49760 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.96■□□□□ 0.95
CLK2P49760 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLK2P49760 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.96■□□□□ 0.95
CLK2P49760 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLK2P49760 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.95■□□□□ 0.95
CLK2P49760 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.95■□□□□ 0.94
CLK2P49760 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.95■□□□□ 0.94
CLK2P49760 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLK2P49760 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLK2P49760 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.95■□□□□ 0.94
CLK2P49760 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 PCED1CP-201ENST00000419887 785 ntBASIC20.95■□□□□ 0.94
CLK2P49760 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLK2P49760 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.95■□□□□ 0.94
CLK2P49760 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.95■□□□□ 0.94
CLK2P49760 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.95■□□□□ 0.94
CLK2P49760 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.95■□□□□ 0.94
CLK2P49760 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.95■□□□□ 0.94
CLK2P49760 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.95■□□□□ 0.94
CLK2P49760 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.95■□□□□ 0.94
CLK2P49760 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.95■□□□□ 0.94
CLK2P49760 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLK2P49760 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.94■□□□□ 0.94
CLK2P49760 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CLK2P49760 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLK2P49760 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLK2P49760 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLK2P49760 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLK2P49760 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLK2P49760 AL162741.1-201ENST00000565563 1558 ntBASIC20.94■□□□□ 0.94
CLK2P49760 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms