Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.67■□□□□ 0.42
PRIM2P49643 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRIM2P49643 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.67■□□□□ 0.42
PRIM2P49643 FAM207BP-201ENST00000447172 505 ntBASIC17.67■□□□□ 0.42
PRIM2P49643 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.67■□□□□ 0.42
PRIM2P49643 AP001412.1-201ENST00000608405 714 ntBASIC17.67■□□□□ 0.42
PRIM2P49643 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.67■□□□□ 0.42
PRIM2P49643 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.67■□□□□ 0.42
PRIM2P49643 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.67■□□□□ 0.42
PRIM2P49643 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRIM2P49643 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.67■□□□□ 0.42
PRIM2P49643 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PRIM2P49643 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 LTB4R2-202ENST00000528054 3092 ntBASIC17.66■□□□□ 0.42
PRIM2P49643 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PRIM2P49643 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.66■□□□□ 0.42
PRIM2P49643 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRIM2P49643 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRIM2P49643 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PRIM2P49643 FAM197Y1-201ENST00000421178 764 ntBASIC17.66■□□□□ 0.42
PRIM2P49643 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.66■□□□□ 0.42
PRIM2P49643 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.66■□□□□ 0.42
PRIM2P49643 MIR6786-201ENST00000616843 113 ntBASIC17.66■□□□□ 0.42
PRIM2P49643 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.66■□□□□ 0.42
PRIM2P49643 FSCN1P1-201ENST00000568912 1481 ntBASIC17.66■□□□□ 0.42
PRIM2P49643 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PRIM2P49643 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PRIM2P49643 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRIM2P49643 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRIM2P49643 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PRIM2P49643 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
PRIM2P49643 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PRIM2P49643 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.65■□□□□ 0.42
PRIM2P49643 HEIH-201ENST00000623091 1652 ntBASIC17.65■□□□□ 0.42
PRIM2P49643 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PRIM2P49643 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PRIM2P49643 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
PRIM2P49643 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
PRIM2P49643 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.65■□□□□ 0.42
PRIM2P49643 CD177P1-201ENST00000606252 935 ntBASIC17.65■□□□□ 0.42
PRIM2P49643 AC130371.2-201ENST00000619443 611 ntBASIC17.65■□□□□ 0.42
PRIM2P49643 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.65■□□□□ 0.42
PRIM2P49643 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.65■□□□□ 0.42
PRIM2P49643 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.65■□□□□ 0.42
PRIM2P49643 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRIM2P49643 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.65■□□□□ 0.42
PRIM2P49643 AC126763.1-201ENST00000552015 2118 ntBASIC17.65■□□□□ 0.42
PRIM2P49643 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PRIM2P49643 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PRIM2P49643 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PRIM2P49643 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PRIM2P49643 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRIM2P49643 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.64■□□□□ 0.41
PRIM2P49643 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRIM2P49643 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.64■□□□□ 0.41
PRIM2P49643 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.64■□□□□ 0.41
PRIM2P49643 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PRIM2P49643 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
PRIM2P49643 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRIM2P49643 RPS2P55-201ENST00000397318 883 ntBASIC17.64■□□□□ 0.41
PRIM2P49643 AC012618.2-201ENST00000428058 849 ntBASIC17.64■□□□□ 0.41
PRIM2P49643 B3GAT3P1-201ENST00000471720 806 ntBASIC17.64■□□□□ 0.41
PRIM2P49643 AC107956.1-201ENST00000494359 873 ntBASIC17.64■□□□□ 0.41
PRIM2P49643 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.64■□□□□ 0.41
PRIM2P49643 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRIM2P49643 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRIM2P49643 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms