Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.29■□□□□ 0.68
FNTAP49354 KRASP1-201ENST00000407852 552 ntBASIC19.29■□□□□ 0.68
FNTAP49354 AC239809.2-201ENST00000415381 517 ntBASIC19.29■□□□□ 0.68
FNTAP49354 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.29■□□□□ 0.68
FNTAP49354 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FNTAP49354 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FNTAP49354 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.29■□□□□ 0.68
FNTAP49354 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FNTAP49354 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.28■□□□□ 0.68
FNTAP49354 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 AC026366.1-201ENST00000488803 879 ntBASIC19.28■□□□□ 0.68
FNTAP49354 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.28■□□□□ 0.68
FNTAP49354 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 AC233263.1-201ENST00000578059 224 ntBASIC19.28■□□□□ 0.68
FNTAP49354 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.28■□□□□ 0.68
FNTAP49354 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.28■□□□□ 0.68
FNTAP49354 AL023875.1-201ENST00000640777 796 ntBASIC19.28■□□□□ 0.68
FNTAP49354 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
FNTAP49354 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
FNTAP49354 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
FNTAP49354 AC138932.1-201ENST00000534164 6830 ntBASIC19.28■□□□□ 0.68
FNTAP49354 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FNTAP49354 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.27■□□□□ 0.68
FNTAP49354 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
FNTAP49354 HTR7P1-201ENST00000538670 1336 ntBASIC19.27■□□□□ 0.68
FNTAP49354 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.27■□□□□ 0.68
FNTAP49354 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.27■□□□□ 0.68
FNTAP49354 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
FNTAP49354 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.27■□□□□ 0.68
FNTAP49354 RCC2P3-201ENST00000418112 1537 ntBASIC19.27■□□□□ 0.68
FNTAP49354 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
FNTAP49354 NIFKP9-201ENST00000419265 221 ntBASIC19.27■□□□□ 0.68
FNTAP49354 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.27■□□□□ 0.68
FNTAP49354 KRT18P41-201ENST00000518924 1277 ntBASIC19.27■□□□□ 0.68
FNTAP49354 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.27■□□□□ 0.68
FNTAP49354 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
FNTAP49354 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FNTAP49354 AC138028.4-201ENST00000564984 1845 ntBASIC19.27■□□□□ 0.68
FNTAP49354 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
FNTAP49354 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.27■□□□□ 0.67
FNTAP49354 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
FNTAP49354 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.27■□□□□ 0.67
FNTAP49354 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FNTAP49354 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.26■□□□□ 0.67
FNTAP49354 GNAS-203ENST00000306120 1878 ntBASIC19.26■□□□□ 0.67
FNTAP49354 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
FNTAP49354 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
FNTAP49354 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.26■□□□□ 0.67
FNTAP49354 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
FNTAP49354 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.26■□□□□ 0.67
FNTAP49354 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.26■□□□□ 0.67
FNTAP49354 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.26■□□□□ 0.67
FNTAP49354 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.26■□□□□ 0.67
FNTAP49354 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
FNTAP49354 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FNTAP49354 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms