Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.2■□□□□ 0.82
USP8P40818 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
USP8P40818 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
USP8P40818 TSPY7P-201ENST00000431358 1114 ntBASIC20.2■□□□□ 0.82
USP8P40818 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.2■□□□□ 0.82
USP8P40818 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.2■□□□□ 0.82
USP8P40818 AP006294.2-201ENST00000641667 209 ntBASIC20.2■□□□□ 0.82
USP8P40818 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.2■□□□□ 0.82
USP8P40818 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP8P40818 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP8P40818 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.2■□□□□ 0.82
USP8P40818 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP8P40818 HEIH-201ENST00000623091 1652 ntBASIC20.19■□□□□ 0.82
USP8P40818 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP8P40818 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 KRT8P3-201ENST00000519669 1449 ntBASIC20.19■□□□□ 0.82
USP8P40818 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
USP8P40818 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.19■□□□□ 0.82
USP8P40818 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 MFAP1P1-201ENST00000442257 1255 ntBASIC20.19■□□□□ 0.82
USP8P40818 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.19■□□□□ 0.82
USP8P40818 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.19■□□□□ 0.82
USP8P40818 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.19■□□□□ 0.82
USP8P40818 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
USP8P40818 OR6D1P-202ENST00000641007 5290 ntBASIC20.19■□□□□ 0.82
USP8P40818 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.19■□□□□ 0.82
USP8P40818 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.19■□□□□ 0.82
USP8P40818 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP8P40818 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP8P40818 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
USP8P40818 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.18■□□□□ 0.82
USP8P40818 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.18■□□□□ 0.82
USP8P40818 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.18■□□□□ 0.82
USP8P40818 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.18■□□□□ 0.82
USP8P40818 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.18■□□□□ 0.82
USP8P40818 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.18■□□□□ 0.82
USP8P40818 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.18■□□□□ 0.82
USP8P40818 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 CRYGFP-201ENST00000418459 633 ntBASIC20.18■□□□□ 0.82
USP8P40818 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.18■□□□□ 0.82
USP8P40818 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 AP003071.4-201ENST00000562276 1284 ntBASIC20.18■□□□□ 0.82
USP8P40818 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.18■□□□□ 0.82
USP8P40818 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.18■□□□□ 0.82
USP8P40818 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.18■□□□□ 0.82
USP8P40818 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.18■□□□□ 0.82
USP8P40818 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.18■□□□□ 0.82
USP8P40818 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms