Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HMGCLP35914 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCLP35914 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.46■□□□□ 0.55
HMGCLP35914 AL441883.1-201ENST00000566170 1045 ntBASIC18.46■□□□□ 0.55
HMGCLP35914 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
HMGCLP35914 AC006011.2-201ENST00000621313 1158 ntBASIC18.46■□□□□ 0.55
HMGCLP35914 AC011558.1-201ENST00000623459 338 ntBASIC18.46■□□□□ 0.55
HMGCLP35914 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.46■□□□□ 0.55
HMGCLP35914 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGCLP35914 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
HMGCLP35914 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.46■□□□□ 0.54
HMGCLP35914 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HMGCLP35914 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCLP35914 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCLP35914 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HMGCLP35914 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCLP35914 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCLP35914 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 RN7SL850P-201ENST00000579959 291 ntBASIC18.45■□□□□ 0.54
HMGCLP35914 MIR3917-201ENST00000580971 93 ntBASIC18.45■□□□□ 0.54
HMGCLP35914 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCLP35914 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGCLP35914 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGCLP35914 AC090164.3-201ENST00000610780 2143 ntBASIC18.45■□□□□ 0.54
HMGCLP35914 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCLP35914 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGCLP35914 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGCLP35914 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGCLP35914 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.44■□□□□ 0.54
HMGCLP35914 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HMGCLP35914 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 MIR149-201ENST00000384879 89 ntBASIC18.44■□□□□ 0.54
HMGCLP35914 RNF152P1-201ENST00000397754 604 ntBASIC18.44■□□□□ 0.54
HMGCLP35914 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.44■□□□□ 0.54
HMGCLP35914 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGCLP35914 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGCLP35914 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.44■□□□□ 0.54
HMGCLP35914 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.44■□□□□ 0.54
HMGCLP35914 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.44■□□□□ 0.54
HMGCLP35914 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGCLP35914 AC009102.3-201ENST00000623118 1491 ntBASIC18.44■□□□□ 0.54
HMGCLP35914 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HMGCLP35914 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCLP35914 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HMGCLP35914 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.43■□□□□ 0.54
HMGCLP35914 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCLP35914 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.43■□□□□ 0.54
HMGCLP35914 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HMGCLP35914 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HMGCLP35914 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCLP35914 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCLP35914 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms