Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
KRT9P35527 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
KRT9P35527 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
KRT9P35527 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
KRT9P35527 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.31■□□□□ 0.84
KRT9P35527 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.31■□□□□ 0.84
KRT9P35527 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.31■□□□□ 0.84
KRT9P35527 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT9P35527 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
KRT9P35527 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT9P35527 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT9P35527 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT9P35527 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT9P35527 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
KRT9P35527 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT9P35527 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KRT9P35527 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KRT9P35527 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT9P35527 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT9P35527 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
KRT9P35527 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
KRT9P35527 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT9P35527 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KRT9P35527 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KRT9P35527 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.3■□□□□ 0.84
KRT9P35527 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.3■□□□□ 0.84
KRT9P35527 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT9P35527 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT9P35527 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT9P35527 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.3■□□□□ 0.84
KRT9P35527 TMEM191A-211ENST00000637163 1067 ntBASIC20.3■□□□□ 0.84
KRT9P35527 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT9P35527 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
KRT9P35527 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KRT9P35527 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT9P35527 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KRT9P35527 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT9P35527 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
KRT9P35527 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT9P35527 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
KRT9P35527 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
KRT9P35527 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT9P35527 AL357033.4-201ENST00000617703 1807 ntBASIC20.29■□□□□ 0.84
KRT9P35527 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KRT9P35527 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KRT9P35527 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT9P35527 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT9P35527 KRT8P3-201ENST00000519669 1449 ntBASIC20.28■□□□□ 0.84
KRT9P35527 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms