Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNGA1P29973 MRPL3P1-201ENST00000400109 1033 ntBASIC21.08■□□□□ 0.97
CNGA1P29973 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNGA1P29973 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.08■□□□□ 0.97
CNGA1P29973 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNGA1P29973 AC010240.3-201ENST00000607688 395 ntBASIC21.08■□□□□ 0.97
CNGA1P29973 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.08■□□□□ 0.97
CNGA1P29973 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNGA1P29973 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CNGA1P29973 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.08■□□□□ 0.97
CNGA1P29973 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNGA1P29973 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CNGA1P29973 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNGA1P29973 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.08■□□□□ 0.96
CNGA1P29973 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.07■□□□□ 0.96
CNGA1P29973 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNGA1P29973 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.07■□□□□ 0.96
CNGA1P29973 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.07■□□□□ 0.96
CNGA1P29973 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNGA1P29973 KRT16P4-201ENST00000453883 522 ntBASIC21.07■□□□□ 0.96
CNGA1P29973 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.07■□□□□ 0.96
CNGA1P29973 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.07■□□□□ 0.96
CNGA1P29973 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.07■□□□□ 0.96
CNGA1P29973 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 AL032819.2-201ENST00000624543 2162 ntBASIC21.07■□□□□ 0.96
CNGA1P29973 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.07■□□□□ 0.96
CNGA1P29973 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CNGA1P29973 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CNGA1P29973 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNGA1P29973 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CNGA1P29973 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.06■□□□□ 0.96
CNGA1P29973 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.06■□□□□ 0.96
CNGA1P29973 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CNGA1P29973 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.06■□□□□ 0.96
CNGA1P29973 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.06■□□□□ 0.96
CNGA1P29973 AC008556.1-201ENST00000610908 2040 ntBASIC21.06■□□□□ 0.96
CNGA1P29973 AC005332.7-201ENST00000614046 2005 ntBASIC21.06■□□□□ 0.96
CNGA1P29973 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 RCC2P3-201ENST00000418112 1537 ntBASIC21.06■□□□□ 0.96
CNGA1P29973 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.06■□□□□ 0.96
CNGA1P29973 AP000593.1-201ENST00000393668 712 ntBASIC21.06■□□□□ 0.96
CNGA1P29973 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.06■□□□□ 0.96
CNGA1P29973 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CNGA1P29973 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.06■□□□□ 0.96
CNGA1P29973 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.06■□□□□ 0.96
CNGA1P29973 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CNGA1P29973 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.06■□□□□ 0.96
CNGA1P29973 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.06■□□□□ 0.96
CNGA1P29973 AL353801.3-201ENST00000609898 542 ntBASIC21.06■□□□□ 0.96
CNGA1P29973 AC120114.3-201ENST00000611923 658 ntBASIC21.06■□□□□ 0.96
CNGA1P29973 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CNGA1P29973 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.06■□□□□ 0.96
CNGA1P29973 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.06■□□□□ 0.96
CNGA1P29973 AC233702.3-201ENST00000578656 1387 ntBASIC21.06■□□□□ 0.96
CNGA1P29973 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNGA1P29973 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.06■□□□□ 0.96
CNGA1P29973 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.06■□□□□ 0.96
CNGA1P29973 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CNGA1P29973 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CNGA1P29973 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNGA1P29973 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CNGA1P29973 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNGA1P29973 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNGA1P29973 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNGA1P29973 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.05■□□□□ 0.96
CNGA1P29973 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.05■□□□□ 0.96
CNGA1P29973 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.05■□□□□ 0.96
CNGA1P29973 AC106795.1-205ENST00000512851 1056 ntBASIC21.05■□□□□ 0.96
CNGA1P29973 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.05■□□□□ 0.96
CNGA1P29973 AC104390.1-201ENST00000555663 520 ntBASIC21.05■□□□□ 0.96
CNGA1P29973 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.05■□□□□ 0.96
CNGA1P29973 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.05■□□□□ 0.96
CNGA1P29973 Z69720.1-201ENST00000601483 472 ntBASIC21.05■□□□□ 0.96
CNGA1P29973 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNGA1P29973 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNGA1P29973 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.05■□□□□ 0.96
CNGA1P29973 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNGA1P29973 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CNGA1P29973 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNGA1P29973 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.04■□□□□ 0.96
CNGA1P29973 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CNGA1P29973 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNGA1P29973 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.04■□□□□ 0.96
CNGA1P29973 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms