Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PTPN6P29350 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PTPN6P29350 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPN6P29350 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN6P29350 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN6P29350 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN6P29350 MESTP1-201ENST00000404287 994 ntBASIC17.61■□□□□ 0.41
PTPN6P29350 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.61■□□□□ 0.41
PTPN6P29350 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.61■□□□□ 0.41
PTPN6P29350 CKBP1-201ENST00000565489 1086 ntBASIC17.61■□□□□ 0.41
PTPN6P29350 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PTPN6P29350 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN6P29350 MYC-208ENST00000641036 567 ntBASIC17.61■□□□□ 0.41
PTPN6P29350 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 FSCN1P1-201ENST00000568912 1481 ntBASIC17.61■□□□□ 0.41
PTPN6P29350 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTPN6P29350 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN6P29350 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN6P29350 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN6P29350 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN6P29350 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 AC008556.1-201ENST00000610908 2040 ntBASIC17.6■□□□□ 0.41
PTPN6P29350 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN6P29350 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTPN6P29350 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN6P29350 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPN6P29350 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PTPN6P29350 AC004951.3-201ENST00000418645 1148 ntBASIC17.6■□□□□ 0.41
PTPN6P29350 RBM17P1-201ENST00000453646 1190 ntBASIC17.6■□□□□ 0.41
PTPN6P29350 B3GAT3P1-201ENST00000471720 806 ntBASIC17.6■□□□□ 0.41
PTPN6P29350 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN6P29350 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN6P29350 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN6P29350 MIR6786-201ENST00000616843 113 ntBASIC17.6■□□□□ 0.41
PTPN6P29350 AC073912.3-201ENST00000624414 853 ntBASIC17.6■□□□□ 0.41
PTPN6P29350 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PTPN6P29350 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 RCC2P3-201ENST00000418112 1537 ntBASIC17.6■□□□□ 0.41
PTPN6P29350 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN6P29350 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN6P29350 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN6P29350 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN6P29350 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN6P29350 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN6P29350 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN6P29350 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PTPN6P29350 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN6P29350 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN6P29350 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN6P29350 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN6P29350 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN6P29350 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN6P29350 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN6P29350 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN6P29350 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PTPN6P29350 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN6P29350 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN6P29350 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN6P29350 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN6P29350 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN6P29350 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN6P29350 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
PTPN6P29350 AC011506.1-201ENST00000474329 610 ntBASIC17.59■□□□□ 0.41
PTPN6P29350 KRT18P41-201ENST00000518924 1277 ntBASIC17.59■□□□□ 0.41
PTPN6P29350 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN6P29350 AC130371.2-201ENST00000619443 611 ntBASIC17.59■□□□□ 0.41
PTPN6P29350 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN6P29350 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN6P29350 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN6P29350 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN6P29350 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN6P29350 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN6P29350 AP000997.3-201ENST00000623333 2250 ntBASIC17.59■□□□□ 0.41
PTPN6P29350 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN6P29350 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.58■□□□□ 0.41
PTPN6P29350 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.41
PTPN6P29350 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN6P29350 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN6P29350 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms