Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.99■□□□□ 0.15
CD40P25942 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CD40P25942 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.99■□□□□ 0.15
CD40P25942 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CD40P25942 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD40P25942 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CD40P25942 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CD40P25942 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CD40P25942 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CD40P25942 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CD40P25942 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.98■□□□□ 0.15
CD40P25942 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.98■□□□□ 0.15
CD40P25942 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.98■□□□□ 0.15
CD40P25942 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.98■□□□□ 0.15
CD40P25942 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.98■□□□□ 0.15
CD40P25942 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CD40P25942 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CD40P25942 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CD40P25942 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.98■□□□□ 0.15
CD40P25942 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.98■□□□□ 0.15
CD40P25942 AC120498.9-201ENST00000339021 3867 ntBASIC15.98■□□□□ 0.15
CD40P25942 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.98■□□□□ 0.15
CD40P25942 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CD40P25942 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CD40P25942 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.98■□□□□ 0.15
CD40P25942 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD40P25942 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.97■□□□□ 0.15
CD40P25942 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.97■□□□□ 0.15
CD40P25942 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CD40P25942 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.97■□□□□ 0.15
CD40P25942 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CD40P25942 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CD40P25942 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.97■□□□□ 0.15
CD40P25942 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.97■□□□□ 0.15
CD40P25942 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CD40P25942 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.97■□□□□ 0.15
CD40P25942 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.97■□□□□ 0.15
CD40P25942 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD40P25942 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.96■□□□□ 0.15
CD40P25942 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.96■□□□□ 0.15
CD40P25942 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.96■□□□□ 0.15
CD40P25942 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CD40P25942 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.96■□□□□ 0.15
CD40P25942 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.96■□□□□ 0.15
CD40P25942 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.96■□□□□ 0.15
CD40P25942 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.96■□□□□ 0.15
CD40P25942 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CD40P25942 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD40P25942 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.96■□□□□ 0.14
CD40P25942 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD40P25942 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD40P25942 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD40P25942 AC093525.10-201ENST00000625130 1569 ntBASIC15.96■□□□□ 0.14
CD40P25942 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms