Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.66■□□□□ 0.1
COL8A2P25067 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.66■□□□□ 0.1
COL8A2P25067 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.66■□□□□ 0.1
COL8A2P25067 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
COL8A2P25067 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.66■□□□□ 0.1
COL8A2P25067 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.66■□□□□ 0.1
COL8A2P25067 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
COL8A2P25067 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.66■□□□□ 0.1
COL8A2P25067 HOXB1-202ENST00000577092 1414 ntBASIC15.66■□□□□ 0.1
COL8A2P25067 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 AL357033.4-201ENST00000617703 1807 ntBASIC15.66■□□□□ 0.1
COL8A2P25067 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.66■□□□□ 0.1
COL8A2P25067 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL8A2P25067 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL8A2P25067 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.65■□□□□ 0.1
COL8A2P25067 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.65■□□□□ 0.1
COL8A2P25067 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.65■□□□□ 0.1
COL8A2P25067 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.65■□□□□ 0.1
COL8A2P25067 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 HEIH-201ENST00000623091 1652 ntBASIC15.65■□□□□ 0.1
COL8A2P25067 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.65■□□□□ 0.1
COL8A2P25067 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.65■□□□□ 0.1
COL8A2P25067 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.65■□□□□ 0.1
COL8A2P25067 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.65■□□□□ 0.1
COL8A2P25067 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.65■□□□□ 0.1
COL8A2P25067 AC010240.3-201ENST00000607688 395 ntBASIC15.65■□□□□ 0.1
COL8A2P25067 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL8A2P25067 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
COL8A2P25067 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.65■□□□□ 0.1
COL8A2P25067 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.65■□□□□ 0.1
COL8A2P25067 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL8A2P25067 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL8A2P25067 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL8A2P25067 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COL8A2P25067 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.64■□□□□ 0.09
COL8A2P25067 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
COL8A2P25067 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL8A2P25067 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.64■□□□□ 0.09
COL8A2P25067 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.64■□□□□ 0.09
COL8A2P25067 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.64■□□□□ 0.09
COL8A2P25067 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COL8A2P25067 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.64■□□□□ 0.09
COL8A2P25067 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.64■□□□□ 0.09
COL8A2P25067 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.64■□□□□ 0.09
COL8A2P25067 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.64■□□□□ 0.09
COL8A2P25067 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
COL8A2P25067 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.64■□□□□ 0.09
COL8A2P25067 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.64■□□□□ 0.09
COL8A2P25067 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 AL391807.1-203ENST00000604392 2365 ntBASIC15.64■□□□□ 0.09
COL8A2P25067 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.64■□□□□ 0.09
COL8A2P25067 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL8A2P25067 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.64■□□□□ 0.09
COL8A2P25067 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COL8A2P25067 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
COL8A2P25067 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.63■□□□□ 0.09
COL8A2P25067 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.63■□□□□ 0.09
COL8A2P25067 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.63■□□□□ 0.09
COL8A2P25067 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL8A2P25067 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms