Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRM3P20309 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHRM3P20309 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRM3P20309 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRM3P20309 FITM1-202ENST00000559294 800 ntBASIC18.48■□□□□ 0.55
CHRM3P20309 AC090164.3-201ENST00000610780 2143 ntBASIC18.48■□□□□ 0.55
CHRM3P20309 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRM3P20309 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRM3P20309 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
CHRM3P20309 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHRM3P20309 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRM3P20309 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHRM3P20309 AC018470.1-201ENST00000624790 3129 ntBASIC18.47■□□□□ 0.55
CHRM3P20309 GPAT2P1-201ENST00000444924 1672 ntBASIC18.47■□□□□ 0.55
CHRM3P20309 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.47■□□□□ 0.55
CHRM3P20309 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRM3P20309 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHRM3P20309 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRM3P20309 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.47■□□□□ 0.55
CHRM3P20309 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRM3P20309 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.47■□□□□ 0.55
CHRM3P20309 AL023284.2-201ENST00000405850 579 ntBASIC18.47■□□□□ 0.55
CHRM3P20309 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRM3P20309 MCCD1P1-208ENST00000445732 328 ntBASIC18.47■□□□□ 0.55
CHRM3P20309 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.47■□□□□ 0.55
CHRM3P20309 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 AC093827.2-201ENST00000512654 315 ntBASIC18.47■□□□□ 0.55
CHRM3P20309 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRM3P20309 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.47■□□□□ 0.55
CHRM3P20309 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRM3P20309 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 AC126763.1-201ENST00000552015 2118 ntBASIC18.47■□□□□ 0.55
CHRM3P20309 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRM3P20309 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CHRM3P20309 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHRM3P20309 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRM3P20309 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRM3P20309 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHRM3P20309 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRM3P20309 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRM3P20309 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRM3P20309 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CHRM3P20309 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.46■□□□□ 0.55
CHRM3P20309 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHRM3P20309 SLC25A1P2-201ENST00000430693 912 ntBASIC18.46■□□□□ 0.55
CHRM3P20309 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.46■□□□□ 0.55
CHRM3P20309 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.46■□□□□ 0.55
CHRM3P20309 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.46■□□□□ 0.55
CHRM3P20309 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.46■□□□□ 0.55
CHRM3P20309 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRM3P20309 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.45■□□□□ 0.54
CHRM3P20309 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHRM3P20309 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHRM3P20309 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.45■□□□□ 0.54
CHRM3P20309 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHRM3P20309 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHRM3P20309 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRM3P20309 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHRM3P20309 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 AC066615.1-201ENST00000640911 628 ntBASIC18.45■□□□□ 0.54
CHRM3P20309 MYC-208ENST00000641036 567 ntBASIC18.45■□□□□ 0.54
CHRM3P20309 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CHRM3P20309 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CHRM3P20309 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHRM3P20309 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRM3P20309 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHRM3P20309 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms