Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.91■□□□□ 0.78
CD58P19256 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CD58P19256 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.91■□□□□ 0.78
CD58P19256 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 AC005082.1-201ENST00000413042 2259 ntBASIC19.91■□□□□ 0.78
CD58P19256 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CD58P19256 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.91■□□□□ 0.78
CD58P19256 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CD58P19256 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD58P19256 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CD58P19256 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.9■□□□□ 0.78
CD58P19256 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD58P19256 AC126763.1-201ENST00000552015 2118 ntBASIC19.9■□□□□ 0.78
CD58P19256 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD58P19256 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.9■□□□□ 0.78
CD58P19256 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD58P19256 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD58P19256 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CD58P19256 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.9■□□□□ 0.78
CD58P19256 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.9■□□□□ 0.78
CD58P19256 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.9■□□□□ 0.78
CD58P19256 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.9■□□□□ 0.78
CD58P19256 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD58P19256 AL138966.2-201ENST00000621997 464 ntBASIC19.9■□□□□ 0.78
CD58P19256 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.9■□□□□ 0.78
CD58P19256 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD58P19256 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CD58P19256 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 KRT18P23-201ENST00000435622 1283 ntBASIC19.89■□□□□ 0.77
CD58P19256 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.89■□□□□ 0.77
CD58P19256 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.89■□□□□ 0.77
CD58P19256 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CD58P19256 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.89■□□□□ 0.77
CD58P19256 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.89■□□□□ 0.77
CD58P19256 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.89■□□□□ 0.77
CD58P19256 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD58P19256 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CD58P19256 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.88■□□□□ 0.77
CD58P19256 AC073508.3-201ENST00000619697 1419 ntBASIC19.88■□□□□ 0.77
CD58P19256 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CD58P19256 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CD58P19256 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.88■□□□□ 0.77
CD58P19256 KRT18P21-201ENST00000515767 1272 ntBASIC19.88■□□□□ 0.77
CD58P19256 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.88■□□□□ 0.77
CD58P19256 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.88■□□□□ 0.77
CD58P19256 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.88■□□□□ 0.77
CD58P19256 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CD58P19256 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CD58P19256 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.88■□□□□ 0.77
CD58P19256 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.88■□□□□ 0.77
CD58P19256 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.88■□□□□ 0.77
CD58P19256 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.88■□□□□ 0.77
CD58P19256 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD58P19256 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.87■□□□□ 0.77
CD58P19256 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD58P19256 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD58P19256 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD58P19256 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD58P19256 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD58P19256 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.87■□□□□ 0.77
CD58P19256 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD58P19256 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD58P19256 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD58P19256 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CD58P19256 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.87■□□□□ 0.77
CD58P19256 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms