Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VCLP18206 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VCLP18206 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.65■□□□□ 0.58
VCLP18206 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
VCLP18206 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
VCLP18206 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
VCLP18206 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VCLP18206 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
VCLP18206 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VCLP18206 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VCLP18206 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.64■□□□□ 0.57
VCLP18206 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VCLP18206 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 NOC2LP1-202ENST00000452600 2235 ntBASIC18.64■□□□□ 0.57
VCLP18206 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.64■□□□□ 0.57
VCLP18206 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VCLP18206 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 LIN28AP1-201ENST00000429574 405 ntBASIC18.64■□□□□ 0.57
VCLP18206 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.64■□□□□ 0.57
VCLP18206 AL353719.1-201ENST00000566847 864 ntBASIC18.64■□□□□ 0.57
VCLP18206 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
VCLP18206 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.64■□□□□ 0.57
VCLP18206 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
VCLP18206 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.64■□□□□ 0.57
VCLP18206 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCLP18206 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
VCLP18206 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
VCLP18206 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 NOC2LP2-201ENST00000407594 1944 ntBASIC18.63■□□□□ 0.57
VCLP18206 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 HMGA1P5-201ENST00000412453 271 ntBASIC18.63■□□□□ 0.57
VCLP18206 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VCLP18206 ECEL1P2-202ENST00000465689 757 ntBASIC18.63■□□□□ 0.57
VCLP18206 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.63■□□□□ 0.57
VCLP18206 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.63■□□□□ 0.57
VCLP18206 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
VCLP18206 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.63■□□□□ 0.57
VCLP18206 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
VCLP18206 AL023803.3-201ENST00000615559 522 ntBASIC18.63■□□□□ 0.57
VCLP18206 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VCLP18206 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VCLP18206 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.63■□□□□ 0.57
VCLP18206 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.63■□□□□ 0.57
VCLP18206 AC092338.2-201ENST00000568827 1415 ntBASIC18.63■□□□□ 0.57
VCLP18206 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.63■□□□□ 0.57
VCLP18206 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.63■□□□□ 0.57
VCLP18206 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCLP18206 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.63■□□□□ 0.57
VCLP18206 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.63■□□□□ 0.57
VCLP18206 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCLP18206 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
VCLP18206 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VCLP18206 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.62■□□□□ 0.57
VCLP18206 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
VCLP18206 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.62■□□□□ 0.57
VCLP18206 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCLP18206 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCLP18206 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.62■□□□□ 0.57
VCLP18206 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VCLP18206 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VCLP18206 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCLP18206 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VCLP18206 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.62■□□□□ 0.57
VCLP18206 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCLP18206 AC113347.1-201ENST00000413321 391 ntBASIC18.62■□□□□ 0.57
VCLP18206 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
VCLP18206 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.62■□□□□ 0.57
VCLP18206 AC007663.1-201ENST00000438948 1240 ntBASIC18.62■□□□□ 0.57
VCLP18206 SLC25A3P1-201ENST00000443844 931 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms