Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.64■□□□□ 0.57
CTPS1P17812 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.64■□□□□ 0.57
CTPS1P17812 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.64■□□□□ 0.57
CTPS1P17812 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.64■□□□□ 0.57
CTPS1P17812 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CTPS1P17812 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.64■□□□□ 0.57
CTPS1P17812 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTPS1P17812 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.64■□□□□ 0.57
CTPS1P17812 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTPS1P17812 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
CTPS1P17812 AL020996.1-203ENST00000536896 2307 ntBASIC18.63■□□□□ 0.57
CTPS1P17812 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.63■□□□□ 0.57
CTPS1P17812 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CTPS1P17812 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.63■□□□□ 0.57
CTPS1P17812 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.63■□□□□ 0.57
CTPS1P17812 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.63■□□□□ 0.57
CTPS1P17812 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.63■□□□□ 0.57
CTPS1P17812 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.63■□□□□ 0.57
CTPS1P17812 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.63■□□□□ 0.57
CTPS1P17812 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTPS1P17812 KRT8P50-201ENST00000562022 1438 ntBASIC18.63■□□□□ 0.57
CTPS1P17812 HOXB1-202ENST00000577092 1414 ntBASIC18.63■□□□□ 0.57
CTPS1P17812 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTPS1P17812 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CTPS1P17812 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS1P17812 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.62■□□□□ 0.57
CTPS1P17812 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS1P17812 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 AL359075.1-203ENST00000462729 1002 ntBASIC18.62■□□□□ 0.57
CTPS1P17812 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.62■□□□□ 0.57
CTPS1P17812 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS1P17812 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.62■□□□□ 0.57
CTPS1P17812 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.62■□□□□ 0.57
CTPS1P17812 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS1P17812 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CTPS1P17812 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.62■□□□□ 0.57
CTPS1P17812 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS1P17812 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS1P17812 AC126763.1-201ENST00000552015 2118 ntBASIC18.62■□□□□ 0.57
CTPS1P17812 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS1P17812 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.62■□□□□ 0.57
CTPS1P17812 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS1P17812 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS1P17812 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CTPS1P17812 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS1P17812 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CTPS1P17812 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS1P17812 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTPS1P17812 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.61■□□□□ 0.57
CTPS1P17812 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.61■□□□□ 0.57
CTPS1P17812 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS1P17812 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS1P17812 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS1P17812 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.61■□□□□ 0.57
CTPS1P17812 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.61■□□□□ 0.57
CTPS1P17812 AC104390.1-201ENST00000555663 520 ntBASIC18.61■□□□□ 0.57
CTPS1P17812 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTPS1P17812 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS1P17812 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.61■□□□□ 0.57
CTPS1P17812 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.61■□□□□ 0.57
CTPS1P17812 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.61■□□□□ 0.57
CTPS1P17812 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS1P17812 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.61■□□□□ 0.57
CTPS1P17812 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS1P17812 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms