Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.09■□□□□ 0.49
PCNAP12004 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCNAP12004 CRYGFP-201ENST00000418459 633 ntBASIC18.09■□□□□ 0.49
PCNAP12004 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCNAP12004 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.09■□□□□ 0.49
PCNAP12004 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCNAP12004 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.09■□□□□ 0.49
PCNAP12004 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.09■□□□□ 0.49
PCNAP12004 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.09■□□□□ 0.49
PCNAP12004 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.08■□□□□ 0.49
PCNAP12004 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCNAP12004 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCNAP12004 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCNAP12004 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCNAP12004 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCNAP12004 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCNAP12004 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCNAP12004 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCNAP12004 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.08■□□□□ 0.48
PCNAP12004 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.08■□□□□ 0.48
PCNAP12004 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.08■□□□□ 0.48
PCNAP12004 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCNAP12004 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.08■□□□□ 0.48
PCNAP12004 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCNAP12004 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCNAP12004 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.08■□□□□ 0.48
PCNAP12004 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCNAP12004 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCNAP12004 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.08■□□□□ 0.48
PCNAP12004 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.08■□□□□ 0.48
PCNAP12004 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCNAP12004 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCNAP12004 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNAP12004 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCNAP12004 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PCNAP12004 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.07■□□□□ 0.48
PCNAP12004 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNAP12004 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNAP12004 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNAP12004 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 PCDHB18P-201ENST00000524813 2368 ntBASIC18.07■□□□□ 0.48
PCNAP12004 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PCNAP12004 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCNAP12004 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNAP12004 SNORA78-201ENST00000459373 127 ntBASIC18.07■□□□□ 0.48
PCNAP12004 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.07■□□□□ 0.48
PCNAP12004 AC068587.9-201ENST00000641814 219 ntBASIC18.07■□□□□ 0.48
PCNAP12004 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCNAP12004 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNAP12004 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCNAP12004 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 RCC2P3-201ENST00000418112 1537 ntBASIC18.07■□□□□ 0.48
PCNAP12004 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNAP12004 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNAP12004 KRT8P32-201ENST00000512863 1461 ntBASIC18.07■□□□□ 0.48
PCNAP12004 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.06■□□□□ 0.48
PCNAP12004 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 AC096733.2-201ENST00000609937 1394 ntBASIC18.06■□□□□ 0.48
PCNAP12004 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCNAP12004 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.06■□□□□ 0.48
PCNAP12004 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCNAP12004 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCNAP12004 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.06■□□□□ 0.48
PCNAP12004 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.06■□□□□ 0.48
PCNAP12004 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.06■□□□□ 0.48
PCNAP12004 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.06■□□□□ 0.48
PCNAP12004 MIR4785-201ENST00000585005 73 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms