Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC175P0C221 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC175P0C221 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC175P0C221 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC175P0C221 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC175P0C221 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.04■□□□□ 0.8
CCDC175P0C221 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC175P0C221 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC175P0C221 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC175P0C221 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC175P0C221 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC175P0C221 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC175P0C221 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC175P0C221 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCDC175P0C221 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC175P0C221 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC175P0C221 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.03■□□□□ 0.8
CCDC175P0C221 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC175P0C221 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC175P0C221 AL162430.1-201ENST00000480705 870 ntBASIC20.03■□□□□ 0.8
CCDC175P0C221 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 AC008687.6-201ENST00000596318 630 ntBASIC20.03■□□□□ 0.8
CCDC175P0C221 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.03■□□□□ 0.8
CCDC175P0C221 AL121832.2-201ENST00000610979 668 ntBASIC20.03■□□□□ 0.8
CCDC175P0C221 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CCDC175P0C221 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC175P0C221 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC175P0C221 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC175P0C221 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC175P0C221 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC175P0C221 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC175P0C221 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC175P0C221 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC175P0C221 CDCA4P2-201ENST00000441182 718 ntBASIC20.02■□□□□ 0.8
CCDC175P0C221 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC175P0C221 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC175P0C221 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC175P0C221 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC175P0C221 SOX15-203ENST00000570788 1093 ntBASIC20.02■□□□□ 0.8
CCDC175P0C221 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC175P0C221 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC175P0C221 MIR5787-201ENST00000611784 55 ntBASIC20.02■□□□□ 0.8
CCDC175P0C221 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC175P0C221 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC175P0C221 AC009053.2-201ENST00000563701 2365 ntBASIC20.02■□□□□ 0.8
CCDC175P0C221 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC175P0C221 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC175P0C221 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC175P0C221 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC175P0C221 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC175P0C221 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC175P0C221 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC175P0C221 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC175P0C221 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.79
CCDC175P0C221 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CCDC175P0C221 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC175P0C221 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 POU5F1P3-201ENST00000428824 1078 ntBASIC20.01■□□□□ 0.79
CCDC175P0C221 AC026185.1-201ENST00000445748 174 ntBASIC20.01■□□□□ 0.79
CCDC175P0C221 AC097658.1-201ENST00000475555 843 ntBASIC20.01■□□□□ 0.79
CCDC175P0C221 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC175P0C221 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC175P0C221 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC175P0C221 AC022517.1-201ENST00000592429 346 ntBASIC20.01■□□□□ 0.79
CCDC175P0C221 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC175P0C221 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC175P0C221 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC175P0C221 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC175P0C221 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms