Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PARP1P09874 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PARP1P09874 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PARP1P09874 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PARP1P09874 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
PARP1P09874 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PARP1P09874 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PARP1P09874 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PARP1P09874 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
PARP1P09874 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PARP1P09874 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PARP1P09874 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
PARP1P09874 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.52■■□□□ 1.04
PARP1P09874 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.52■■□□□ 1.04
PARP1P09874 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.52■■□□□ 1.04
PARP1P09874 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PARP1P09874 AC079602.3-201ENST00000623931 403 ntBASIC21.52■■□□□ 1.04
PARP1P09874 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.52■■□□□ 1.04
PARP1P09874 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.52■■□□□ 1.04
PARP1P09874 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PARP1P09874 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PARP1P09874 AC112777.1-201ENST00000540175 1423 ntBASIC21.52■■□□□ 1.04
PARP1P09874 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PARP1P09874 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PARP1P09874 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.52■■□□□ 1.03
PARP1P09874 ANO7L1-203ENST00000602586 1720 ntBASIC21.52■■□□□ 1.03
PARP1P09874 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.52■■□□□ 1.03
PARP1P09874 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.52■■□□□ 1.03
PARP1P09874 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PARP1P09874 AL499627.1-201ENST00000569373 2188 ntBASIC21.51■■□□□ 1.03
PARP1P09874 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PARP1P09874 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PARP1P09874 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PARP1P09874 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.51■■□□□ 1.03
PARP1P09874 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PARP1P09874 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
PARP1P09874 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.51■■□□□ 1.03
PARP1P09874 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.51■■□□□ 1.03
PARP1P09874 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.51■■□□□ 1.03
PARP1P09874 ZNF444P1-201ENST00000559497 298 ntBASIC21.51■■□□□ 1.03
PARP1P09874 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PARP1P09874 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.51■■□□□ 1.03
PARP1P09874 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PARP1P09874 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PARP1P09874 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PARP1P09874 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PARP1P09874 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.51■■□□□ 1.03
PARP1P09874 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.51■■□□□ 1.03
PARP1P09874 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PARP1P09874 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
PARP1P09874 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.51■■□□□ 1.03
PARP1P09874 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PARP1P09874 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.5■■□□□ 1.03
PARP1P09874 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 FAM86EP-206ENST00000510506 987 ntBASIC21.5■■□□□ 1.03
PARP1P09874 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.5■■□□□ 1.03
PARP1P09874 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.5■■□□□ 1.03
PARP1P09874 AC009065.1-201ENST00000564055 1225 ntBASIC21.5■■□□□ 1.03
PARP1P09874 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 CROCCP3-202ENST00000420820 1947 ntBASIC21.5■■□□□ 1.03
PARP1P09874 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PARP1P09874 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PARP1P09874 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PARP1P09874 AL163051.1-201ENST00000569214 1512 ntBASIC21.5■■□□□ 1.03
PARP1P09874 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP1P09874 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PARP1P09874 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PARP1P09874 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PARP1P09874 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.49■■□□□ 1.03
PARP1P09874 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP1P09874 AL031598.1-201ENST00000561511 1773 ntBASIC21.49■■□□□ 1.03
PARP1P09874 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP1P09874 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.49■■□□□ 1.03
PARP1P09874 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP1P09874 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.49■■□□□ 1.03
PARP1P09874 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.49■■□□□ 1.03
PARP1P09874 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.49■■□□□ 1.03
PARP1P09874 AL136038.4-201ENST00000603606 1261 ntBASIC21.49■■□□□ 1.03
PARP1P09874 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.49■■□□□ 1.03
PARP1P09874 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PARP1P09874 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.49■■□□□ 1.03
PARP1P09874 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PARP1P09874 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PARP1P09874 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.49■■□□□ 1.03
PARP1P09874 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PARP1P09874 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PARP1P09874 MYLKP1-201ENST00000509077 1580 ntBASIC21.48■■□□□ 1.03
PARP1P09874 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PARP1P09874 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms